| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3953 |
|---|
| Symbol | |
|---|
| ID | 5381515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1366712 |
|---|
| End bp | 1368007 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640836639 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001372487 |
|---|
| Protein GI | 153011273 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.690116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA TTGCAATCGC GAGACATGAC ATGAGCACCG CCCAAGCCGC TGCAAGCGAC
GAAACCGTCG CTGCAGCCCG CCAGGAAAAT ATGGCCGTCG AAGATAATCA CGAGCGCTAC
TGGAAGCAGA ATCTGCTGAT CTGCCTCATC GGTTCGTTCA CGACGCTCAT TGCCATGTCG
CTCCTCCTCC CCTTCCTGCC GCTCTATGTG GAACAATTGG GCGTCACCGA TCACGCGGCA
ATCGTGCAGT GGTCAGGTAT CGCTTACGGC GCCACCTTTC TGGCAGCAGC CTTCGTCGCG
CCGCTGTGGG GCAGGCTCGG CGACCGCTAT GGACGTAAGC TGATGCTGAT CCGCGCCAGC
CTCGGCATGG CCATCGCCAT GTCGCTGATC GGCATGGTGA CGAGTGTCTG GCAGCTGGTG
GCGCTGCGCC TGTTCGTGGG CATCGCAGGC GGCTATTCGT CCGGCTCGAT GATCCTCGTC
GCTACCCAGA CGCCAAAAGA AAAGACCGGT TGGGCGCTGG GCGCGCTTTC GGCTGGCATC
ATGGCGGGCA ATCTGGCCGG CCCGCTGCTC GGCGGCGCTT TGCCGCCGCT GATCGGCATT
CGCGCAACCT TCTGGCTAGC TGGTGGCGTG ATCTTTCTCA CCTTTCTGGC CACCACCTTT
CTGATCCGCG AAGAGCGCAA GCCACCGAAG CCGACCAAAG AGCAGAAGGC GGAATCCATC
TGGGCTGCCA TTCCTGACAG GAAACCGGTT ATCGCCATGC TGGTGACGGG TATGCTGCTG
CTTTTTGCCA ATATGTCGAT TGAGCCGATC ATCACCGTCT ATGTGATCCA ACTGATGGAC
GATCAGACGA AAGTGACACT GATTTCCGGC GTGGTGATGG CTGCTGCAGC CCTCGGCAGC
ATCATGTCGT CCTCGCGACT GGGGCGCCTT GCCGACCGCA TTGGCCACAC CCGCGTCATC
ATCGGGGCAC TGTCAGTTTC CGCGCTGCTT CTGATCCCGC AGGCTTTCGT GACGGAAGCC
TGGCAGCTGA TCGGCCTGCG TTTTCTGATG GGGCTGGCGC TGGGCGGATT GCTGCCCTGC
ATCACCAGCG TCATCCGGCA CAATGTGCCC GACCGCGTAG CGGGCGGCAT TCTGGGCTAT
TCCGTCTCGG CCCAATATGT CGGGCAGGTT GCTGGCCCCG TTGCTGGCGG TTTCGTCGGC
GGTCACTTCG GCATGCGTTC CGTTTTTCTC GGCACATGCC TGATTATGGC TCTCGGCGCA
TTTTATAACT GGACCGTCCT GCGCAAGAAC CGATAA
|
|---|
| Protein sequence | MEYIAIARHD MSTAQAAASD ETVAAARQEN MAVEDNHERY WKQNLLICLI GSFTTLIAMS
LLLPFLPLYV EQLGVTDHAA IVQWSGIAYG ATFLAAAFVA PLWGRLGDRY GRKLMLIRAS
LGMAIAMSLI GMVTSVWQLV ALRLFVGIAG GYSSGSMILV ATQTPKEKTG WALGALSAGI
MAGNLAGPLL GGALPPLIGI RATFWLAGGV IFLTFLATTF LIREERKPPK PTKEQKAESI
WAAIPDRKPV IAMLVTGMLL LFANMSIEPI ITVYVIQLMD DQTKVTLISG VVMAAAALGS
IMSSSRLGRL ADRIGHTRVI IGALSVSALL LIPQAFVTEA WQLIGLRFLM GLALGGLLPC
ITSVIRHNVP DRVAGGILGY SVSAQYVGQV AGPVAGGFVG GHFGMRSVFL GTCLIMALGA
FYNWTVLRKN R
|
|---|
| |