| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3900 |
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| Symbol | |
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| ID | 5381329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 1309687 |
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| End bp | 1310961 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836585 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001372434 |
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| Protein GI | 153011220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA CAACCATCGT TCTCATCATG CTGGCGCTGA TCGCGCTCAA TATGCGCCTC
TATGTGGCCA TTTTGATTGC GGTCTTCACC TATTTCACCT TTTTCAACCA GATGCCGATA
GCGATTGCCG TGCAGCGCTT CATCAGCCCG GCACAGAACA CGTCGCTGCT TGCCATTCCG
TTCTTCATCA TGCTTGGTAC GGTGATGTCG CATACCGGCA TTGCAGAACG TCTGATCAAG
GTCGCGGAAA TTCTGGTCGG TCGTATGCGC GGCGGCATGG CACTCACCAA CATCATGGTT
TCCACCCTGA TGGGTGGCGT CAGCGCTTCC AATCTGGCTG ACAGCGCCAT GCTCACCCGC
ATGATGGTGC CGGAAATGGT CAAGCGTGGC TATGACAAAG CGTTCTCCTG CGCGGTGACG
GCTGCTGGCT CGCTGATTAC GCCGATCATT CCTCCCGGCA TTGCGCTCAT CATCTATGGT
CTGATTGCGG ATGTTTCCAT TGGCAAGATG TTCATGGCAG GTGTGCTGCC GGGCATTCTG
GGCGCCGTTA TCCTGATGAT CGCGGCCTAT GCGACATCGG TAAAGCGCGG CTACAAGCCA
AGCCGTGAAA AGCGGATGAG CGGCGCCGAA GTTGCCTCGA CGCTTGCTTC GGCATGGCCT
GCGGTGCTGC TGCTGTTCGC GATCATTGGC GGCATCCGCT TGAACATCTT CACCCCGACA
GAAGCCGGTG CAGTTGCCGT TACGCTGGTT CTGATTATCG GCTTCGTGAT CTATCGCGAA
ATGCGCATCT CGCATGTGGT GGATTCGCTG ATCGAAACAG CGAAATCGAC CGCGTCCGTC
ATGCTGGTCA TCATGGCATC ATCGGCGCTC GCATGGGTGT TTTCGCTTGA ACAGGCCGGC
CAGTCGCTGA TGCAGCTGAT CTCGTCCTTC ACCAGCAATC CTTATGCGTT CCTGCTGGCA
GTCAACGTGA TCTTGCTGAT CCTCGGCGCG CTGATCGAGG GCACAGCTCT GATGATCGTT
CTGGTGCCGC TTCTGATGCC GACGGTAAAG GCTCTGGGCA TTGATCCTGT GCATTTCGGT
ATCATCGTGA TTATCAACCT GTCGATTGGC ACGCTGACAC CGCCTGTTGG AACGGTCATG
CTGATGGTCT GCAATATTGC GAAGGTGAGG GTGGGAGATT TCACTCGCCA GGCATTCAGC
ATGTATATGG CGCTGTTCAT CCTGCTGGCG CTGGTCACTT ACGTGCCGAT TATCTCAACC
TATCTGGCTC ATTAG
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| Protein sequence | MNLTTIVLIM LALIALNMRL YVAILIAVFT YFTFFNQMPI AIAVQRFISP AQNTSLLAIP
FFIMLGTVMS HTGIAERLIK VAEILVGRMR GGMALTNIMV STLMGGVSAS NLADSAMLTR
MMVPEMVKRG YDKAFSCAVT AAGSLITPII PPGIALIIYG LIADVSIGKM FMAGVLPGIL
GAVILMIAAY ATSVKRGYKP SREKRMSGAE VASTLASAWP AVLLLFAIIG GIRLNIFTPT
EAGAVAVTLV LIIGFVIYRE MRISHVVDSL IETAKSTASV MLVIMASSAL AWVFSLEQAG
QSLMQLISSF TSNPYAFLLA VNVILLILGA LIEGTALMIV LVPLLMPTVK ALGIDPVHFG
IIVIINLSIG TLTPPVGTVM LMVCNIAKVR VGDFTRQAFS MYMALFILLA LVTYVPIIST
YLAH
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