| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3879 |
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| Symbol | |
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| ID | 5381663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | + |
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| Start bp | 1288011 |
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| End bp | 1289336 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836564 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001372413 |
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| Protein GI | 153011199 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCGG AATTCATAAC GCTCTTCATG TTTGCAACCA TGATGGTGCT GCTCATGACC
GGGCAGCGCG TATTCGGCGT GATCGGTTTT GTCGGCTCGC TCGCCGCTCT CCTGCTTTGG
GGCAAAGGCT CGTTCGAGAT GCCGTATAAT GCCACCTTTG CGGTGCTGAA CTGGTATCCG
CTTATCACTG TGCCCTTCTT CGTCTTCATG GGCTACATGC TCTCGGAATC GGGCATTGCC
AGCAATCTCT ACCGCATGTT CCACGTGTGG TTCGGCGGCA TTCGCGGCGG TCTGGCACTG
GGTACGATCG GCCTGATGGT CATTATTTCC TGCATGAACG GCCTGAGCGT TGCAGGCATG
GCAATCGGCG CTACCGTCGC ACTGCCAGAG CTTCTCAAGC GTGGCTATAA CAAGGTTATG
GTAACGGGCG TCATTCAGGC TGGCAGTTCA CTTGGTATCC TTATTCCGCC AAGCGTCGTG
CTGGTACTTT ATGCGATGAT TGCCCGGCAG CCGGTATTGC AGCTCTGGCT CGCAGGGATT
GGTCCCGGCC TTCTCATGGC CGCGCTCTTT GCGATCTATA TCTACATACG CTGCCGCCTC
CAGCCCGAGC TCGGACCGAC TTTGCCACAA GAAGAACTGG ACAGGATCAC ATGGCACGAC
CGCTTCGTCG CGCTGCGCGC AGGCATTCTG CCACTCGTGG TCTTCGGCGC GATGATGGGC
CTGTTCCTCA CCGGCGTTAC CAGCCTTGTT GAAAGCTCGG CCGTCGGCGC ATTGCTTGCA
ACGCTTGCCG CGCTTTTCAC TGGACGCCTC AACAAGATTG TCTGGGAAAC CACGTCACGG
AACAGTCTCA CCGTCACCTG CATGTTCCTC TGGATCATTC TGGCTGCACT CTGCTTTTCA
TCGGTCTATG ATGGCCTCGG AGCGGTGAAA GCCATTGAAA GCGTGTTGCT GAACACCTTC
GATCTGTCGC CCTGGACAAT CCTGATACTG ATGCTGTTTT CGTTCATCAT ATTGGGCATG
TTCCTCGATG ACACGGCAAT GCTGGTCATC GTGGCACCGC TTTACATACC GCTGGTCAAG
AGCCTCGGCT TCAACGCCAT CTGGTTCGGT GTGCTCTACA CGATCACCTG CCAGATCGCA
TATATCACGC CGCCTTTCGG GTACAATCTC TTCATGATGC GGGCCTTGGC CCCGAAGGAA
GTCACGCTGA TAGACATCTA TCGTTCAATC GTACCGTTCT TCTTCCTCAT GGTGCTGACC
ATCATTCTTC TGATGATCTT TCCGCAGATC GCGATGTGGT TGCCCAACTG GTACACCGGA
CGATGA
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| Protein sequence | MSSEFITLFM FATMMVLLMT GQRVFGVIGF VGSLAALLLW GKGSFEMPYN ATFAVLNWYP
LITVPFFVFM GYMLSESGIA SNLYRMFHVW FGGIRGGLAL GTIGLMVIIS CMNGLSVAGM
AIGATVALPE LLKRGYNKVM VTGVIQAGSS LGILIPPSVV LVLYAMIARQ PVLQLWLAGI
GPGLLMAALF AIYIYIRCRL QPELGPTLPQ EELDRITWHD RFVALRAGIL PLVVFGAMMG
LFLTGVTSLV ESSAVGALLA TLAALFTGRL NKIVWETTSR NSLTVTCMFL WIILAALCFS
SVYDGLGAVK AIESVLLNTF DLSPWTILIL MLFSFIILGM FLDDTAMLVI VAPLYIPLVK
SLGFNAIWFG VLYTITCQIA YITPPFGYNL FMMRALAPKE VTLIDIYRSI VPFFFLMVLT
IILLMIFPQI AMWLPNWYTG R
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