Gene Oant_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3878 
Symbol 
ID5381662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand+ 
Start bp1287463 
End bp1288014 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content53% 
IMG OID640836563 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001372412 
Protein GI153011198 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGC CGATCAGACT GTTCGTCAAA TATGTTGATG CAGTGAATTA CTATGTCGGG 
CGCTTCGCGA TGTATCTCTT CTTCGTGCTC GGCGCCTGCC TTCTATATTC GACTTTTTCG 
CGTGTTGTTC TCGGCGTACC GGTCAACTGG GTATTGGAAA TGTCCCAGTT TCTGCTCTCG 
GCCTACTATC TGCTCGGTGG AGCATACGCC ATGCAACAGG GCGCACATGT GCGCATGGAC 
CTGTTCTTTG ACCGTCTTTC ACCGCGCAGG AAAATGATCA CCGACATGAT CACCATCCTG 
TTCATCATCT TCTATCTCGG TGTGATGGTC GCCGGTGGCA TTTCATCGAC CAACTACGCC 
ATCGTTTACA GCCAGAAGAA CTATACCGCC TGGGCGCCGC TTCTCTGGCC GATCAAGCTC 
ATCATGACTG TCGGTATTCT CCTGCTGCTG CTGCAGTGCG TCTCCAATTT CTTCAAGGAC 
TGGGCCTCCC TGCGTGGACA GCCGATCAGC ACCATCGCGG GTCCTGCCAT TGAGGAAGGG 
CATCACATAT GA
 
Protein sequence
MPKPIRLFVK YVDAVNYYVG RFAMYLFFVL GACLLYSTFS RVVLGVPVNW VLEMSQFLLS 
AYYLLGGAYA MQQGAHVRMD LFFDRLSPRR KMITDMITIL FIIFYLGVMV AGGISSTNYA 
IVYSQKNYTA WAPLLWPIKL IMTVGILLLL LQCVSNFFKD WASLRGQPIS TIAGPAIEEG 
HHI