Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3875 |
Symbol | |
ID | 5381489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1285011 |
End bp | 1285664 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640836560 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001372409 |
Protein GI | 153011195 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.417982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACG GCGACGGGAA TGACGACACC GAACTGACCG GACGGGACAA GGTTCTCGGA CGCAGGCGGC GCATTCTCGG TGCAATACGG GCTGCCGCAA TCGATGAATT TGCCGAAAAA GGCCTTGCGG GGGCATCCAC GCAAGGCATT GCGCACCGCG CCGGTCTCAC CAAGCCGCAA CTGCACTACT ATATTTCGAG CAAGGAAGAG CTTTACGAGG ATATCATCGT CTACATCCTC GAAGAATGGG AAGACATATT CCTCGGGGCC AGTACCGAAG ACGACCCTGC CAAGGTGATC CGCCAATATA TCCGCGCCAA GCTCGAATAT AGCCAGAAAA GCCCCAAAGC CTCGCGCCTT TTCACCACAG AAATTGCCAA TGGCGCACCT TATCTGAGCC GCCATTGGAA AAAGCACGTC GCAGCGACCC ATAATGCAGT GAAACTCATC CAGTCGTGGG TGGATGATGG TCGGATCAAA CCTGTCGATC CCCTACTATT TCAGATGCAT ATCTGGGCCG TCACCCAGCA TTATGCCGAC TTTGAAACGC AGGTTCGCAG CATGATGGAA CTCGACAAGG ACGAACCGCT CGATCTCGAA AGGATCGAGA AAGAGGTTTC GGCGCTGTTT CTACGGGCCT GTGGGTTGGA ATAA
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Protein sequence | MNNGDGNDDT ELTGRDKVLG RRRRILGAIR AAAIDEFAEK GLAGASTQGI AHRAGLTKPQ LHYYISSKEE LYEDIIVYIL EEWEDIFLGA STEDDPAKVI RQYIRAKLEY SQKSPKASRL FTTEIANGAP YLSRHWKKHV AATHNAVKLI QSWVDDGRIK PVDPLLFQMH IWAVTQHYAD FETQVRSMME LDKDEPLDLE RIEKEVSALF LRACGLE
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