| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3836 |
|---|
| Symbol | |
|---|
| ID | 5382101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1237576 |
|---|
| End bp | 1238409 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640836522 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001372371 |
|---|
| Protein GI | 153011157 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCC CCGCCCCGTC ATCAATCAAC GTTCCGACGA ATATCAAGGA ATTCGAGGCG
AAGCTGCTGG AGGTTTCCGA CCGTTTGCCG AAGAGGCTGA AACAGTGCGC CGATTTCGTT
GCCGCCAACC AGGACCGTAT CGCTGTGTCG ACCGTCGCCG AGATGGCCGA AGGTGCGGGT
GTGCAGAGCT CAGCCTTCAT GCGTTTCTGC CAGATCATGG GTTTCTCCGG CTTTTCGGAG
ATGCAGAAGC TGTTCCGGGA TTCCTATGCG GGCGGCTGGC CTGACTATTC AACCAGATTG
CAACATTTGC GAGAAACGGC GACCGGCAGC GCCCCTGCCC TTCTTGCCGA GTTTGCCGAA
GCAGGGCGCA CGTCTCTTGA AGGGCTACTC AAAACCATTG ATCCAGATGC ACTCGAAAAG
GCCGTTCAGC TTTTAGCCAG CGCGCAGACA ATCCACATTG TCGGCATCCG CCGTGCTTTT
CCCGTCGCGA GCTACCTGGC TTACGCGCTG GAGAAGATGC AAGTGCCTGC CATGCTGCAC
AGCGCTGTCG GCAAACTGGA GAACCTGCAT GCTATTCGCG AAGGTGATGT GCTTCTGGCG
ATTACCTTCT CCCCCTATTC ACCGGAAACG GTCGCAATGG CCGAAACTGT CGCTGCGCGT
GGTATCGACG TCGTCGGCAT CACTGACACG TTTGTCAGCC CGATGAGTAA ATCCGCCAAA
CAGACATTGC TCGTTTCAGA GGTGGATTTC GGCGCCTTCC GCTCACTCTC CGCAACGCTT
TGTCTTGCTA TAGCGCTCGC TGTAGCCGTA GGCACCGCAC GTCAAAGCGA CTGA
|
|---|
| Protein sequence | MDSPAPSSIN VPTNIKEFEA KLLEVSDRLP KRLKQCADFV AANQDRIAVS TVAEMAEGAG
VQSSAFMRFC QIMGFSGFSE MQKLFRDSYA GGWPDYSTRL QHLRETATGS APALLAEFAE
AGRTSLEGLL KTIDPDALEK AVQLLASAQT IHIVGIRRAF PVASYLAYAL EKMQVPAMLH
SAVGKLENLH AIREGDVLLA ITFSPYSPET VAMAETVAAR GIDVVGITDT FVSPMSKSAK
QTLLVSEVDF GAFRSLSATL CLAIALAVAV GTARQSD
|
|---|
| |