Gene Oant_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3822 
Symbol 
ID5381894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1220620 
End bp1222980 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content53% 
IMG OID640836508 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001372357 
Protein GI153011143 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG TCCTGGAATG CGTAACAGTA CAGCACGATC AACCTTTCGT GGTTTTGGCT 
GCATCCATCT CATTTGCAAG CATGTTTGCT TTCTTTCTGT TGCTCGTCCG CGCGCGGGAA
TGCACGGAAA GCCGCCGTGA CAATTGGCTG GCGATAAGCG CGCTTGCGGG TGGATTGGGC
GTGTGGGCAA CCCATTTCGT GGCGATGCTT GCATATCGTG GCACCGTGGC AATCGAGTTC
GATTTTACGA TCACGGTTCT TTCAGCGGCA ATTGCTGTAC TTGGCTTTTG GCTGAGTGTG
CGCTTCCTGA ATGGTAAGGC GTTCAAATAC GTTTTGATCG CAGCCATTTC AGCAACCCTA
TCGATTGCCG CAATGCATTT CACTGGTATG AGCGCAATCA GAGCAGCTGC AGATGTTCAC
TATGACCTTC CACCGATCCT GATTGGCAGT ATAATATCGA TCCTGCTTTT GCTGGCTGCT
TTCTGGTTTG TGATGAATAC TGCCGGCTGG ATGCGCGTTT TGCTACCGAC CGTTGGGGGG
ATTCTTGCTG TTTGCACGCT CCACTTTACT GCAGTTGCGT CGACCGAGCT GGTTCCAAAC
CCGACCCTTC CTGCTGCTGA TCCGCTGGGC ATAGGGCGTC TCTGGTTGAT CGGTGCAATT
GCCGCTGTTG TCAGTATAGT AGCGCTGACA ACGATTATTG CAGTATTTGT AGATCGTTAC
ATGACAGACT TGAAGGGATT TGCGAACGCT ACCCTGGACG GACTGGCCGT CGTTCGTGAT
GGTGGAATAG TCGAGATGAA CGCTCGGTTT TCCGATCTCA TGCGGCGCAG TGAAAAGGCG
CTTGTCGGTG TTGCGCCGGA TACTCTGTTG CTGGCGGCTG ATGGGCTCCC CGTCTGTGCT
TCTCGCCCGG AAGCAATCGA AGCCGCACCC AGATTTCCAA ATGATGAGCG TATCTTTGAA
CTCGCAGTTC ATACGATTGA GTATCAGGGA CGCCCTTGCG AAGTTCTGGC TGTCCGTGAT
CTTACTGAAA AGCGTACGGC CCAGCGTCAG ATCGAGCATA TGGCGCGGCA TGATACACTC
ACGGATTTAC CTAACCGAAT GTTCTTTGAA GAGCGTCTCG CAAACGCAGT GGCACGCCGC
AGCCGAGAGC CTTTTGCTGT ACTCGCGCTT GATCTGGACC GGTTCAAAGC AGTGAACGAT
ATTTTCGGCC ATGCCGAAGG TGATCGCGTA TTGAAGACGG TTTCCAGCAT CCTGAAGCGA
TCCATAAACG GTATAGACAC GGCAGCACGT ATTGGCGGCG ACGAGTTTAT CATTCTGCAG
GTCGGGGTTC CACAGCCCAA GGGTGCACGG AAACTGTCCG AAAAGATTCT GGATACCTTC
CGGTCAGAAC TGAATACAGT GCTCGATCCG ACTGCTGTTG GTGTCAGCAT TGGCGTTGCC
GTGTATCCGA ATGACGGCAA GGATGCAGAA GCCATCCGAC ATGCGGCAGA CATTGCGCTT
TATCGGGCGA AGACAGAAGG ACGGGGTATG GTTGCATTCT ACTCGCCGGA AATGGACCGC
GAAATAAGAG AGCGTCGCCA GATGGAGGCC GATTTGCGCC ACGCCATGGT TCGCGGTCAG
ATCAGTATTG CCTATCAGCC ATTGTTCGCG ACAGCAGATG GTAGTTGTAC CGGCTATGAA
GCACTGGTTC GTTGGAACCA TCCGGAACGT GGCCAGATAC CACCTGAGGT TTTTGTTCCT
ATCGCTGAGG AAACGGGGGT AATTGTCCCA CTCGGTGAGT GGGTTCTGCG TGAAGCCTGC
CGCACTGCCG CCGGATGGGA GAAGCATTTA ACTATCGCCG TAAACCTCTC CCCCGTACAG
TTCCGTTTGA TCAATCTGCC GGACACGGTG AGTTCGGTTC TCGCACAAAC GGGCCTGGAT
CCTACGAGAT TGGAGCTGGA GGTAACAGAA GCCGCATTGA TGAAGGACCG ATTGACGACA
CTCGAACTGT TGCGTCGCAT GAAGAAGCTG GGTGTCCGTA TCGTGATGGA TGATTTCGGC
ACTGGCTATT CGTCGCTCAG TAACCTTCAA AGTTTCCCAT TCGACAAGAT CAAGATCGAC
CGCAGTTTCA TCACCAGCAT GGAAACGGAT GTTAGTGCGA GAGCCATTGT ACGAGCCATC
GTCGGGTTGG GTCGTAGCCT TGATCTCCCG GTGGTGGCCG AGGGTATAGA AACTTTTGAC
CAGCATCGCA TGGTGATCGA AGAGGGTTGC GAACAGGTTC AAGGCTTTCT TTTCGGGCGT
CCGGCCAATG CGCCAGCGTC AGCGGATCCG TCTTCGCGGC TTCCTAGCAA AAAGGGCGGT
GGGCAAGTAA AGACTACCTA A
 
Protein sequence
MFKVLECVTV QHDQPFVVLA ASISFASMFA FFLLLVRARE CTESRRDNWL AISALAGGLG 
VWATHFVAML AYRGTVAIEF DFTITVLSAA IAVLGFWLSV RFLNGKAFKY VLIAAISATL
SIAAMHFTGM SAIRAAADVH YDLPPILIGS IISILLLLAA FWFVMNTAGW MRVLLPTVGG
ILAVCTLHFT AVASTELVPN PTLPAADPLG IGRLWLIGAI AAVVSIVALT TIIAVFVDRY
MTDLKGFANA TLDGLAVVRD GGIVEMNARF SDLMRRSEKA LVGVAPDTLL LAADGLPVCA
SRPEAIEAAP RFPNDERIFE LAVHTIEYQG RPCEVLAVRD LTEKRTAQRQ IEHMARHDTL
TDLPNRMFFE ERLANAVARR SREPFAVLAL DLDRFKAVND IFGHAEGDRV LKTVSSILKR
SINGIDTAAR IGGDEFIILQ VGVPQPKGAR KLSEKILDTF RSELNTVLDP TAVGVSIGVA
VYPNDGKDAE AIRHAADIAL YRAKTEGRGM VAFYSPEMDR EIRERRQMEA DLRHAMVRGQ
ISIAYQPLFA TADGSCTGYE ALVRWNHPER GQIPPEVFVP IAEETGVIVP LGEWVLREAC
RTAAGWEKHL TIAVNLSPVQ FRLINLPDTV SSVLAQTGLD PTRLELEVTE AALMKDRLTT
LELLRRMKKL GVRIVMDDFG TGYSSLSNLQ SFPFDKIKID RSFITSMETD VSARAIVRAI
VGLGRSLDLP VVAEGIETFD QHRMVIEEGC EQVQGFLFGR PANAPASADP SSRLPSKKGG
GQVKTT