Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3822 |
Symbol | |
ID | 5381894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 1220620 |
End bp | 1222980 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640836508 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001372357 |
Protein GI | 153011143 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG TCCTGGAATG CGTAACAGTA CAGCACGATC AACCTTTCGT GGTTTTGGCT GCATCCATCT CATTTGCAAG CATGTTTGCT TTCTTTCTGT TGCTCGTCCG CGCGCGGGAA TGCACGGAAA GCCGCCGTGA CAATTGGCTG GCGATAAGCG CGCTTGCGGG TGGATTGGGC GTGTGGGCAA CCCATTTCGT GGCGATGCTT GCATATCGTG GCACCGTGGC AATCGAGTTC GATTTTACGA TCACGGTTCT TTCAGCGGCA ATTGCTGTAC TTGGCTTTTG GCTGAGTGTG CGCTTCCTGA ATGGTAAGGC GTTCAAATAC GTTTTGATCG CAGCCATTTC AGCAACCCTA TCGATTGCCG CAATGCATTT CACTGGTATG AGCGCAATCA GAGCAGCTGC AGATGTTCAC TATGACCTTC CACCGATCCT GATTGGCAGT ATAATATCGA TCCTGCTTTT GCTGGCTGCT TTCTGGTTTG TGATGAATAC TGCCGGCTGG ATGCGCGTTT TGCTACCGAC CGTTGGGGGG ATTCTTGCTG TTTGCACGCT CCACTTTACT GCAGTTGCGT CGACCGAGCT GGTTCCAAAC CCGACCCTTC CTGCTGCTGA TCCGCTGGGC ATAGGGCGTC TCTGGTTGAT CGGTGCAATT GCCGCTGTTG TCAGTATAGT AGCGCTGACA ACGATTATTG CAGTATTTGT AGATCGTTAC ATGACAGACT TGAAGGGATT TGCGAACGCT ACCCTGGACG GACTGGCCGT CGTTCGTGAT GGTGGAATAG TCGAGATGAA CGCTCGGTTT TCCGATCTCA TGCGGCGCAG TGAAAAGGCG CTTGTCGGTG TTGCGCCGGA TACTCTGTTG CTGGCGGCTG ATGGGCTCCC CGTCTGTGCT TCTCGCCCGG AAGCAATCGA AGCCGCACCC AGATTTCCAA ATGATGAGCG TATCTTTGAA CTCGCAGTTC ATACGATTGA GTATCAGGGA CGCCCTTGCG AAGTTCTGGC TGTCCGTGAT CTTACTGAAA AGCGTACGGC CCAGCGTCAG ATCGAGCATA TGGCGCGGCA TGATACACTC ACGGATTTAC CTAACCGAAT GTTCTTTGAA GAGCGTCTCG CAAACGCAGT GGCACGCCGC AGCCGAGAGC CTTTTGCTGT ACTCGCGCTT GATCTGGACC GGTTCAAAGC AGTGAACGAT ATTTTCGGCC ATGCCGAAGG TGATCGCGTA TTGAAGACGG TTTCCAGCAT CCTGAAGCGA TCCATAAACG GTATAGACAC GGCAGCACGT ATTGGCGGCG ACGAGTTTAT CATTCTGCAG GTCGGGGTTC CACAGCCCAA GGGTGCACGG AAACTGTCCG AAAAGATTCT GGATACCTTC CGGTCAGAAC TGAATACAGT GCTCGATCCG ACTGCTGTTG GTGTCAGCAT TGGCGTTGCC GTGTATCCGA ATGACGGCAA GGATGCAGAA GCCATCCGAC ATGCGGCAGA CATTGCGCTT TATCGGGCGA AGACAGAAGG ACGGGGTATG GTTGCATTCT ACTCGCCGGA AATGGACCGC GAAATAAGAG AGCGTCGCCA GATGGAGGCC GATTTGCGCC ACGCCATGGT TCGCGGTCAG ATCAGTATTG CCTATCAGCC ATTGTTCGCG ACAGCAGATG GTAGTTGTAC CGGCTATGAA GCACTGGTTC GTTGGAACCA TCCGGAACGT GGCCAGATAC CACCTGAGGT TTTTGTTCCT ATCGCTGAGG AAACGGGGGT AATTGTCCCA CTCGGTGAGT GGGTTCTGCG TGAAGCCTGC CGCACTGCCG CCGGATGGGA GAAGCATTTA ACTATCGCCG TAAACCTCTC CCCCGTACAG TTCCGTTTGA TCAATCTGCC GGACACGGTG AGTTCGGTTC TCGCACAAAC GGGCCTGGAT CCTACGAGAT TGGAGCTGGA GGTAACAGAA GCCGCATTGA TGAAGGACCG ATTGACGACA CTCGAACTGT TGCGTCGCAT GAAGAAGCTG GGTGTCCGTA TCGTGATGGA TGATTTCGGC ACTGGCTATT CGTCGCTCAG TAACCTTCAA AGTTTCCCAT TCGACAAGAT CAAGATCGAC CGCAGTTTCA TCACCAGCAT GGAAACGGAT GTTAGTGCGA GAGCCATTGT ACGAGCCATC GTCGGGTTGG GTCGTAGCCT TGATCTCCCG GTGGTGGCCG AGGGTATAGA AACTTTTGAC CAGCATCGCA TGGTGATCGA AGAGGGTTGC GAACAGGTTC AAGGCTTTCT TTTCGGGCGT CCGGCCAATG CGCCAGCGTC AGCGGATCCG TCTTCGCGGC TTCCTAGCAA AAAGGGCGGT GGGCAAGTAA AGACTACCTA A
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Protein sequence | MFKVLECVTV QHDQPFVVLA ASISFASMFA FFLLLVRARE CTESRRDNWL AISALAGGLG VWATHFVAML AYRGTVAIEF DFTITVLSAA IAVLGFWLSV RFLNGKAFKY VLIAAISATL SIAAMHFTGM SAIRAAADVH YDLPPILIGS IISILLLLAA FWFVMNTAGW MRVLLPTVGG ILAVCTLHFT AVASTELVPN PTLPAADPLG IGRLWLIGAI AAVVSIVALT TIIAVFVDRY MTDLKGFANA TLDGLAVVRD GGIVEMNARF SDLMRRSEKA LVGVAPDTLL LAADGLPVCA SRPEAIEAAP RFPNDERIFE LAVHTIEYQG RPCEVLAVRD LTEKRTAQRQ IEHMARHDTL TDLPNRMFFE ERLANAVARR SREPFAVLAL DLDRFKAVND IFGHAEGDRV LKTVSSILKR SINGIDTAAR IGGDEFIILQ VGVPQPKGAR KLSEKILDTF RSELNTVLDP TAVGVSIGVA VYPNDGKDAE AIRHAADIAL YRAKTEGRGM VAFYSPEMDR EIRERRQMEA DLRHAMVRGQ ISIAYQPLFA TADGSCTGYE ALVRWNHPER GQIPPEVFVP IAEETGVIVP LGEWVLREAC RTAAGWEKHL TIAVNLSPVQ FRLINLPDTV SSVLAQTGLD PTRLELEVTE AALMKDRLTT LELLRRMKKL GVRIVMDDFG TGYSSLSNLQ SFPFDKIKID RSFITSMETD VSARAIVRAI VGLGRSLDLP VVAEGIETFD QHRMVIEEGC EQVQGFLFGR PANAPASADP SSRLPSKKGG GQVKTT
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