Gene Oant_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3813 
Symbol 
ID5381812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1210786 
End bp1212180 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content55% 
IMG OID640836499 
Productmajor facilitator transporter 
Protein accessionYP_001372348 
Protein GI153011134 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGA TGGATTCGAA CGTCATCTCG ACGTCGCTTC CTGCTATCGC TGCTGACATC 
GGTACAAGCC CTATTGCGCT CAAGCTGGCA CTGACCGCTT ACCTTGTTGC GCTCGCAGTT
TTCATTCCCG TCAGCGGCTG GATGGCGGAT CGCTTCGGGG CCAAGAATGT CTTCCGGGCT
GCAATTGCGG TATTCGTGGT TGGTTCTGTA GCCTGCGCTG CATCGAATTC ACTGACTGCT
TTCGTCGTTG CGCGGTTTTT GCAGGGCATG GGCGGTGCGA TGATGACACC GGTTGGCCGT
CTAGTACTTA TCCGTTCGAC TCCGCGCAGT GAACTTGTGT CAGCTATGGC GTGGCTTACG
ATTCCAGCAA TGGTCGGGCC GCTGGTAGGT CCACCAGTCG GTGGTTTCAT CACGACTTTC
CTGACTTGGC ATTGGATATT CCTGATTAAT GTACCGATCG GTTTCGTCGG TATCTGGTTT
GCAACGCGGT TCCTGCCGGA CACAGACGAG CGCATCGTAA AGCGCCTTGA TTGGACGGGC
TTCTTTCTTT CCGGGATCGC AATGTCTGGC GTTGTCTTCG GACTGTCGGT CGTCAGCCTG
CCAGCCTTGC CGCCAGCGGT TGGTTTTACA ACCCTTGCAA TCGGTATTGT CTGCACGGTT
CTCTATCTTC AACATGCGAG GAGAACCGAT GATCCGCTGC TGAACCTGAA ACTTTTCGAT
AATCAGGTAT TTCGTTCCGC AGTCATCGGC GGCAGCATTT TCCGGTTCGG GATTGGGGCT
ATTCCATTCC TGCTGCCATT GATGTTTCAG CTTGGCTTTG GTCTCACACC GTTTCAATCG
GGTATGATGA CTTTCGTTTC GGCGATCGGT GCGATCAGCA TGAAATTCGG TGCAAAGCGT
ATCTTTGTTC GCGTTGGTTT CCGGCGCGCC TTGATGGCAG GGTCCTTGAT TTCGGCCTGC
TTCATTGCCG TCAACGGCCT GTTCACACCG ACAACACCTT ACTGGATCAT CATCGGCTTT
TTGCTGGTGG GGGGCTTTGC GCGTTCGTTG TTTTTCACTG GTGTCAATGC GCTGGCTTTC
GCCGAAATCC CCGATGAAAA GACCAGTCAG GCGACGCCCA TCACGGCAGT GGCGCAGCAG
GTTTCCATTG CTATCGGTGT GGCATTGGCA GGTGGTATTC TGGAAATCAG TACGTCGTTA
CGCGGAGCCC ATCTCGAGTT GGTGGACTTC CACATCGGCT TCTTTGTGGT TGCTGCCGTT
TCCGCTCTGG CTTTTCTCTG GTTTGCGCGG CTCGCACCTG ATGCAGGCAA GGAACTGTCT
GCGCCAACAG TCGTGAAACA TCACGGTAAG GAGCCCGCAG CCATCGAAGC CGCGAGCACC
TCAGCCGGAA AATAA
 
Protein sequence
MEQMDSNVIS TSLPAIAADI GTSPIALKLA LTAYLVALAV FIPVSGWMAD RFGAKNVFRA 
AIAVFVVGSV ACAASNSLTA FVVARFLQGM GGAMMTPVGR LVLIRSTPRS ELVSAMAWLT
IPAMVGPLVG PPVGGFITTF LTWHWIFLIN VPIGFVGIWF ATRFLPDTDE RIVKRLDWTG
FFLSGIAMSG VVFGLSVVSL PALPPAVGFT TLAIGIVCTV LYLQHARRTD DPLLNLKLFD
NQVFRSAVIG GSIFRFGIGA IPFLLPLMFQ LGFGLTPFQS GMMTFVSAIG AISMKFGAKR
IFVRVGFRRA LMAGSLISAC FIAVNGLFTP TTPYWIIIGF LLVGGFARSL FFTGVNALAF
AEIPDEKTSQ ATPITAVAQQ VSIAIGVALA GGILEISTSL RGAHLELVDF HIGFFVVAAV
SALAFLWFAR LAPDAGKELS APTVVKHHGK EPAAIEAAST SAGK