| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3785 |
|---|
| Symbol | |
|---|
| ID | 5381849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 1175017 |
|---|
| End bp | 1175838 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640836471 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001372320 |
|---|
| Protein GI | 153011106 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0266174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCC GTTTCAATCT CGTATTTGGC GGGTTCGTGT GCATCGTAAT CGTAGGTGCT
GCCGTATTTG CACCATTGCT GGCGCACTAT AATCCGGTTC TCGATGCCGA TCTGATGAAT
GCAGAACTGC CCCCCGATGC ACAATTCTGG TTCGGCACCG ACGCACAGGG CCGCGATGTT
TATTCGCGCA TCCTCTATGG TGCGCAAGTA TCTTTGACCG TTGGTGTCGT CTCGCAGTGC
ATCAACACTG TTATTGGACT GTGTTTTGGC ATTTCTGCCG GTTATTTCGG CGGTTGGTGG
GATGATTTCG TCAATGGTCT GACTAATCTC ATGCTGGCAA TTCCGTCGCT GATCTTCGCG
CTGGCAATCA TGGCTGTCCT CGGCCCCGGT TTGCCAAGCC TTCTGCTCGC GCTTGGTCTG
ACGAATTGGT CCTGGACTTG CCGCATTGCG CGCAGTTCCA CCCTTTCGCT AAAGAAGCAG
GGCTATATTC AGGCTGCCAA GATGCTTGGC TATAGCGATG CCCGCATCAT GATCACGCAG
ATCGTGCCAA ACATGATCGG GCCTATTCTT GTGATCGGTA CGCTCGGAAT GGGCGACGCA
ATTCTGGCAG AAGCAGCACT TTCCTATCTT GGTCTTGGGA TCAGTCCACC AGATCCAAGC
TGGGGTAACA TGCTCACCGA TGCGCGTGAG TTGATCGTGA ACGCGCCTTG GGCTGCCGTG
TTTCCCGGTT TGGCCATCTT CTTCACGGTG CTTGGACTCA ATCTGTTCGG GGACGGTCTT
CGCGACTGGC TCGACCCGCA TATGAGGACA CGCAAGGTAT GA
|
|---|
| Protein sequence | MKLRFNLVFG GFVCIVIVGA AVFAPLLAHY NPVLDADLMN AELPPDAQFW FGTDAQGRDV
YSRILYGAQV SLTVGVVSQC INTVIGLCFG ISAGYFGGWW DDFVNGLTNL MLAIPSLIFA
LAIMAVLGPG LPSLLLALGL TNWSWTCRIA RSSTLSLKKQ GYIQAAKMLG YSDARIMITQ
IVPNMIGPIL VIGTLGMGDA ILAEAALSYL GLGISPPDPS WGNMLTDARE LIVNAPWAAV
FPGLAIFFTV LGLNLFGDGL RDWLDPHMRT RKV
|
|---|
| |