| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3749 |
|---|
| Symbol | |
|---|
| ID | 5382904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 1134717 |
|---|
| End bp | 1135751 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640836435 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001372284 |
|---|
| Protein GI | 153011070 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGTG ACGATCGCAG GAAAAGTCGC GTTACGCTGC TGGATGTGGC ACGCCATGCC
AACGTATCGC GCGCGACGGC TTCCCTTGTT ATCCGCAAAA GCCCGTTGGT GGGAACAGTA
ACGCGCGAAA AAGTAGAGAA AGCCCTTCAA GAGTTGGGCT ATGTCTACAA TATGGGGGCT
GCTAGCCTCC GGGTAGAGAG ATCGAATACG GTTGGCGTCA TCGTACCCAC CCTTGGCAAC
CCGTTTTACG GCGAATTGCT TTCAGGAATA GACAGTGTTG TGGGTGAAGC AGGGCTGGTC
GTTCTTCTCG CCAATAGTCA CGAGAACTTC ACCAATCAGA GTACCCTTAT GCAGCGTATG
CGTGAGCATG GTGTTGATGG CGTGATCGTT TCGCCAACAG CGGAAACAGC ACCGGAGTTC
GTCGAGCAGC TTGCTGACTG GGGCTTGCCT ATTGTGCAGG TGTTGCGTCA TGTGACCGAT
CGTGTCGATT ACGCAGGCGT TGATTACGCG GGTGGTATGC GGCAGGCGGT TAATCATCTG
GCTACACTTG GGCACAGGAC AATCGCATTC GCTGTGCACG GGCCGATTCA TTCCGCTTAC
CGCGAACGTG TCGAAGGTTT TCGCGAGGCA ATGCAACAAC AAGGGCTCGA TCCTGAGATG
ATTGTCCGCT TTCCGCAGAC GATGCCGGAT ATCGCTAAAG CGGCTCCGCT TCTCTTTCAG
GACGGCCGGG AGCCGACAGC TGCAATCTGC TTCAATGACG TGATTGCGCT AGGCCTTTCG
GCAGGGCTTT ATGATTGCGG GAGAATGGTT GGTGGGGATT TTTCGTTGAT CGGCTTCGAC
GATGTAAGCG ATGCTGAAGC GACCCGCCCC CGGTTGAGTT CCGTGTCAAC CCGACCTGTT
ACAGTTGGTG AGAATGCCGC TGGATTGCTT CTTTCCCGTT TGGCAAACCC GGAAAAACAG
GCGCAGCGGA TCATCAGTGA AACATATTTG CGAGTTCGAC AGTCCTGTGG ACCGGTGAGA
GCCTCTGTTA TCTAA
|
|---|
| Protein sequence | MPSDDRRKSR VTLLDVARHA NVSRATASLV IRKSPLVGTV TREKVEKALQ ELGYVYNMGA
ASLRVERSNT VGVIVPTLGN PFYGELLSGI DSVVGEAGLV VLLANSHENF TNQSTLMQRM
REHGVDGVIV SPTAETAPEF VEQLADWGLP IVQVLRHVTD RVDYAGVDYA GGMRQAVNHL
ATLGHRTIAF AVHGPIHSAY RERVEGFREA MQQQGLDPEM IVRFPQTMPD IAKAAPLLFQ
DGREPTAAIC FNDVIALGLS AGLYDCGRMV GGDFSLIGFD DVSDAEATRP RLSSVSTRPV
TVGENAAGLL LSRLANPEKQ AQRIISETYL RVRQSCGPVR ASVI
|
|---|
| |