| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3728 |
|---|
| Symbol | |
|---|
| ID | 5381755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1113988 |
|---|
| End bp | 1114605 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640836414 |
|---|
| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
|---|
| Protein accession | YP_001372263 |
|---|
| Protein GI | 153011049 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAC CTCTCGGCTA TCTGAAAGAA ACCGTATCAC AGACTGCGGG CCCTTACGTC
CATATCGGAT TGACACCCAA TTTTGTCGGC ATCAACGGCA TTTTCGAGCA GGATCTCGGC
TCCGGCCCTC TCTATGATGA GAAGACGACA GGCGAACGCA TTACCATTAA CGGCCATGTC
ATTGATGGCA TGGGCGCACC ACTCCGCGAT GCGTTGGTAG AAATATGGCA GGCTGATGCG
AAGGGCCTCT ATAACAGCCC CTCCGAAACC GGCGGCAAGG CCGAGCCTGG TTTTCGTGGA
TGGGGCCGTT GTCCGAGCCA TATGGACACG GGCGAGTTCA CTTTCGAGAC GATCAAACCT
GGCCGCGTTT CTTTCAAAGA TGGCCGCCTC ATGGCACCAC ACGTTACCTT GTGGATCGTG
GCCCGCGGCA TTAATCTCGG ACTGCAGACG CGGATGTATT TTTCCGATGA AGCCGATGCG
AATGCAGAGG ATCCGGTCCT TGCTCGTATC GAACATCGCA GCCGGGCGCA AACACTGATT
GGTCAGCGTG AGGGTAGCGT CTATCATTTC GATATTCACT TGCAGGGCGA GAAAGAAACT
GTCTTTTTCG ATATTTGA
|
|---|
| Protein sequence | MVQPLGYLKE TVSQTAGPYV HIGLTPNFVG INGIFEQDLG SGPLYDEKTT GERITINGHV
IDGMGAPLRD ALVEIWQADA KGLYNSPSET GGKAEPGFRG WGRCPSHMDT GEFTFETIKP
GRVSFKDGRL MAPHVTLWIV ARGINLGLQT RMYFSDEADA NAEDPVLARI EHRSRAQTLI
GQREGSVYHF DIHLQGEKET VFFDI
|
|---|
| |