| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3717 |
|---|
| Symbol | |
|---|
| ID | 5382523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 1103876 |
|---|
| End bp | 1104919 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640836403 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001372252 |
|---|
| Protein GI | 153011038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG CTCGCCTTGC CCTGATGGGC GGACTCCTCG CAACCGCACT TTATACTGGC
TCCGCTGCTG CTCGCGACCT GACGGTCGTG TCTTGGGGTG GCAACTATCA GGACGCCCAG
CGTGAAATTT ACTTCAAACC TTTTTCCGAG AAGACCGGCA AACCTTTGCT AGATGAATCC
TGGGACGGTG GTTACGGCGT CGTTCAGGCG AAGGTGAAAG CAGGAAAACC CAACTGGGAT
GTCGTGCAGG TAGAAGCCGA AGAACTTGCT CTCGGCTGTG CTGACGGTCT TTACGAGAAG
ATTGATTGGG ACAAGGTTGG CGGCAAGGAC AAGTTCCTCG ACAGTGCGGT CAATGATTGC
GGTGTAGGGG CAATCGTGTG GTCGACAGCA ATCGCCTATA ATGCGGACAA GCTGAAAGAT
GGCCCACAAT CCTGGGCTGA TTTCTGGGAT GTGAAGAAGT TTCCAGGCAA GCGCTCCTTG
CGTAAGGGTG CCAAGTATAC GCTTGAATTC GCTCTCCTCG CCGACGGGGT CAGCAAGGAT
GAGGTCTATG ATGTGCTCTC AACCCCGGAG GGCGTGGATC GCGCGTTCAA AAAACTTGAT
GAATTGAAGC CGAATATCGT CTGGTGGGAA GCAGGGGCAC AACCACTGCA ATTGCTGGCC
TCGGATGAAG TTGTGATGGC ATCAGCTTAT AATGGGCGCA TCACGGGCAT AAACAGGAGC
GAAGGCAAGA ACTTCAAGGT GGTCTGGCCG GGCAGCATTT ATGCTGTCGA TAGCTGGGTG
ATCCTGAAAG ATGCCGAGAA CAAGGATGCA GGGCTGGATT TCATTGCTTT TGCCAGCCAG
CCCGACAATC AGGTGAAGCT GCCGAAATAT GTCGCTTACG GTCTGCCGAA CAAGGAAGCT
GCAAGCAAGG TGCCTGCGGA ATTCGCATCG GATCTTCCAA CGGCGGAAGC CAATCTGAAA
GACGCCCTTC CTCTTAACGT GGATTTCTGG ATCGATAATT CCGAAGAGTT GACGAAGCGC
TTCAACGCCT GGCTGGCGCA ATAA
|
|---|
| Protein sequence | MKIARLALMG GLLATALYTG SAAARDLTVV SWGGNYQDAQ REIYFKPFSE KTGKPLLDES
WDGGYGVVQA KVKAGKPNWD VVQVEAEELA LGCADGLYEK IDWDKVGGKD KFLDSAVNDC
GVGAIVWSTA IAYNADKLKD GPQSWADFWD VKKFPGKRSL RKGAKYTLEF ALLADGVSKD
EVYDVLSTPE GVDRAFKKLD ELKPNIVWWE AGAQPLQLLA SDEVVMASAY NGRITGINRS
EGKNFKVVWP GSIYAVDSWV ILKDAENKDA GLDFIAFASQ PDNQVKLPKY VAYGLPNKEA
ASKVPAEFAS DLPTAEANLK DALPLNVDFW IDNSEELTKR FNAWLAQ
|
|---|
| |