| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3715 |
|---|
| Symbol | |
|---|
| ID | 5381927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 1101566 |
|---|
| End bp | 1102741 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640836401 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001372250 |
|---|
| Protein GI | 153011036 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTC CATTCGGCAA AACTGTCCGA GCGATATTTC TGATCGCGCC CCTGCTTGTT
TTCATTGTCT TGTTTTTTCT GTGGCCACTT GGGGTGATGA TGAAACAGGC CGTGTCCGAT
ACGGCGGTTT TGCGTGTTCT CCCCCAGACC GCCGAGGCTG TAACTCTTTG GGACGGACAA
TCGGCTCCAT CACCTGAAAT GAAACAGGCG CTCGTGGCAG ACCTGAAGGC TTCGACCGAC
CAGCAGGCCG TAGGCGACAT GGTCCGCCGC TTGAACAGCG CCCAATCGGG CTTTCGTACC
TTGATGAGCA AAACACTTTC AGCCATCGAG AAGGGCGATC CTGTTCCTGA CCTGGAAATG
ATCGACAAAC GATGGAGCCG ACCGGAGTTT TGGCATGCTA TTGCGAATGC GCTTTCACCA
ACAACTGATC GCAACCTGCT CGCGGCGGTC GATATGGAGC GCGATACATC CGGAAAAATT
GTTTCAATGG CGCCCGGTAC ATCGGCCAAC CGGGCGATTA TGCTGCGCAC GTTCTGGATT
GCCGCGCTGG TGACACTTGC CTGTGCAATA ATTGGCTATC CCTATGCCGT CTTGCTCACA
TCATCCTCAG GCTGGATCAG GAGTGTGCTT TTTGCGGCAG TTCTGTTGCC GTTGTGGACA
TCATTGCTGG TGCGTACTGC TGCCTGGTTC ATTCTTCTAC AGGATAAGGG ACTTATCAAC
GATACGTTGA TCTGGCTTGG CGTCACCGAT GGACCGCTAC CGTTGATCTT CAACAGGGCA
GGGGTAGTGA TAGCCATGAC CCATGTACTT TTGCCGTTCA TGGTGCTGCC GATTTATAGC
GTTCTTGTAT CGATCCCGAG CAATCTCATG CCGGCTGCTG CATCGCTCGG CGCACCGCCT
TGGAGGGCTT TCGTGCGGGT ACTACTGCCT TTAAGTATGC GTGGCATCCT GTCTGGCATG
CTGCTCGTGT TCATGAGCGC TATTGGCTAC TATATAACTC CGGCTCTGAT CGGTGGACCG
GGCGACCAGA TGATAAGCTC GATCATCGCC TATTACGCAA CCGGTTCGGC CAACTGGGGT
ATGGCTGGTG CATTGGGGCT CGTGTTGCTC GTCGCCTGTC TCGTACTCTA TGCCGTTTAC
GGACGGCTCA CCGCTGACGA GCGGGGGAGA GCATGA
|
|---|
| Protein sequence | MTVPFGKTVR AIFLIAPLLV FIVLFFLWPL GVMMKQAVSD TAVLRVLPQT AEAVTLWDGQ
SAPSPEMKQA LVADLKASTD QQAVGDMVRR LNSAQSGFRT LMSKTLSAIE KGDPVPDLEM
IDKRWSRPEF WHAIANALSP TTDRNLLAAV DMERDTSGKI VSMAPGTSAN RAIMLRTFWI
AALVTLACAI IGYPYAVLLT SSSGWIRSVL FAAVLLPLWT SLLVRTAAWF ILLQDKGLIN
DTLIWLGVTD GPLPLIFNRA GVVIAMTHVL LPFMVLPIYS VLVSIPSNLM PAAASLGAPP
WRAFVRVLLP LSMRGILSGM LLVFMSAIGY YITPALIGGP GDQMISSIIA YYATGSANWG
MAGALGLVLL VACLVLYAVY GRLTADERGR A
|
|---|
| |