| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3672 |
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| Symbol | |
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| ID | 5382646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | + |
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| Start bp | 1059105 |
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| End bp | 1061468 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836356 |
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| Product | ribonuclease R |
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| Protein accession | YP_001372207 |
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| Protein GI | 153010993 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.330393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCACGCC GTTTTTCCAA ATCCGATACC GGTCGATCCG CACGGACCGA ACGGCGTGCA
GCCAAAGCAA AATCTGCCGA TGGGAACAGC GATCCCAATG CGTTTCTGCC AACCCGCGAA
GAGGTTCTCA AATATATTGA AGAGAATCCT GACCGGGCAG GCAAGCGCGA ACTGGCAAAA
GCATTCAACA TCAAGGGCGA TGCGCGGGTT TATCTGAAAG ATCTTCTACG CGAACTTTCT
GATGAGGGTC TGGTTGAAAA ACGCGCCCGC AAACTGTCTC GCCCTGGCGC ACTACCTGCC
GTTACTGTGC TTGATATTAC AGGACGCGAC GAGGATGGCA GCTTGCTCGC ACGTCCGTCG
GAATGGGACG AGGCCGGTTA CGGCAAACCA CCTATTGTCC TGATCCGCCG CACCCGATTG
AATAAAGCTT CGGAAGGCGG TCCCGCAGTG GGCGTCGGGG ATCGCGTTCT GGCGAAAATA
TTCCGCAGTG AAGATCGCGA CGGACCGGAT TATACCGCCC GCGTCATGAA GCGTCTCGAG
CACCGCACGA ACGCGGTGCT GGGTATTGTT CGCAAGCTCG GCAACGGTGA ATGGCGGTTG
GACCCGGTAA ACAGAAAACA GCCTGAGGTG CAGCTCGATC CGGCACAGCT GGAAAATGCT
GAAGCCGGTG ATCTTGTTGA AGTGGACCTG ATTTCCTCGC GTCGTCAGGG ATTGCCGCGC
GGCAAAGTTC GACAGGTGGT TGGGTCTATC GATAGCGAAA AAGCCCTGTC GATGATTGCC
ATCCATGAGC ATGAAATTCC GCATGTTTTC CCGGCTGAAG CGCTGAGCGA AGCAGAAGCC
GCCCAGCCTG CGACGATGGA CGGTCGGGAA GACTGGCGCG ACATTCCGCT TCTCACCATT
GATCCGGCTG ACGCCAAAGA TCATGACGAC GCCGTTTACG CCGAGCCGGA CAAGGATCCT
GAGAATCCGG GCGGCCAGAT TGTCATCGTG GCTATCGCTG ACGTCGCCGC CTATGTCCGT
CCAGATTCCG CGCTTGATCG TGAAGCACAG AAGCGCGGTA ACTCGGTCTA TTTCCCGGAC
AGGGTCGTGC CGATGCTTCC CGAACGGATT TCAAACAATC TTTGCTCGCT GCGCGAACTG
GAAGATCGCC CTGCCCTTGC GGTCCGTATG ATCTTTGCGG CTGACGGGCG CAAGAAATCG
CACAAGTTCC ATCGCATCAT GATGAAATCG GCGGTTAAGC TTGCCTATTC GCAAGCCCAG
GCTGCCATTG ACGGCGCGCC GGATGACAAG ACCACGCCCA TTCTCGACGG CATACTAAAA
CCGCTGTGGG GCGCCTATGC TGTGCTGAAG CGTGGGCGCG ATGCTCGCGA ACCGCTGGAA
CTCGATTTAC CGGAAAAGAA AATCCTGCTC ACGCCCGATG GCAAGGTAGA CAAGGTTATC
GTTCCTGAAC GGCTCGATGC ACACAAGCTT ATCGAAGAGT TCATGATTCA GGCGAATGTC
GCTGCTGCAG AAACATTGGA AGCGCACCGT CAGCCGTTGA TTTTCCGCAT TCATGATGCT
CCGGCTCTTG CCAAACAGGA AACCCTACGT GAATTCCTGC GTACGCTTGA TCTGAGTCTT
GCCAAAGGCG CGGAGCTGCA ACCCGCGCAG TTCAACCGGA TTCTTGAAGC CGTTGAAGGC
TCGGATCATC AAGAACTGGT CAATCAGGTC GTGCTGCGCA CACAAAGCCA AGCGGAATAT
AACCCTGATA ATATCGGACA TTTCGGCCTG CATTTGAGCC GCTATGCGCA TTTCACCTCG
CCGATCCGCC GTTATGCCGA TCTCATCGTT CACCGCGCTC TGATCAAGGC CCTGAACCTT
GGAAGTGACG GACTAACGAC AGAGGAGGAA GCGCATCTCG AAGAAATCTC CGCGCTCATC
TCCTCGACCG AACGTCGCGC CATGCTGGCC GAGCGTGAAA CTGTTGACCG TCTCATTGCA
CATTTTCTCG CCGCACATCT TGGAGACGAA TATGAAGGGC GCGTGACGGG CGTAACGCGG
GCCGGTCTTT TCGTGAACCT TGCGACATAT GGCGCGGATG GGCTGGTACC CATTTCAACT
TTAGGTCATG AATACTATTT ATATGACGAA GCGAACCATG CGATTGCCGG TGAACGGAGC
GGTAAAGGCT TCCGGCTTGG TGATACAGTG ACGGTTCGGC TTGTAGAAGC GCTCCCCGTT
GCGGGCGCGC TTCGCTTTGA GATGGTTTCG GAACCGCATC CCCTGCCGAT GGCGACCCGC
TCGCATCATA AGGCAAGCCG GACGATGCGT GGGCGAAGGG GTAAACCCGC GGGTATTCCG
CGTCAGAAGA GAAGAGGTCG CTGA
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| Protein sequence | MARRFSKSDT GRSARTERRA AKAKSADGNS DPNAFLPTRE EVLKYIEENP DRAGKRELAK
AFNIKGDARV YLKDLLRELS DEGLVEKRAR KLSRPGALPA VTVLDITGRD EDGSLLARPS
EWDEAGYGKP PIVLIRRTRL NKASEGGPAV GVGDRVLAKI FRSEDRDGPD YTARVMKRLE
HRTNAVLGIV RKLGNGEWRL DPVNRKQPEV QLDPAQLENA EAGDLVEVDL ISSRRQGLPR
GKVRQVVGSI DSEKALSMIA IHEHEIPHVF PAEALSEAEA AQPATMDGRE DWRDIPLLTI
DPADAKDHDD AVYAEPDKDP ENPGGQIVIV AIADVAAYVR PDSALDREAQ KRGNSVYFPD
RVVPMLPERI SNNLCSLREL EDRPALAVRM IFAADGRKKS HKFHRIMMKS AVKLAYSQAQ
AAIDGAPDDK TTPILDGILK PLWGAYAVLK RGRDAREPLE LDLPEKKILL TPDGKVDKVI
VPERLDAHKL IEEFMIQANV AAAETLEAHR QPLIFRIHDA PALAKQETLR EFLRTLDLSL
AKGAELQPAQ FNRILEAVEG SDHQELVNQV VLRTQSQAEY NPDNIGHFGL HLSRYAHFTS
PIRRYADLIV HRALIKALNL GSDGLTTEEE AHLEEISALI SSTERRAMLA ERETVDRLIA
HFLAAHLGDE YEGRVTGVTR AGLFVNLATY GADGLVPIST LGHEYYLYDE ANHAIAGERS
GKGFRLGDTV TVRLVEALPV AGALRFEMVS EPHPLPMATR SHHKASRTMR GRRGKPAGIP
RQKRRGR
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