| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3623 |
|---|
| Symbol | |
|---|
| ID | 5382707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 998971 |
|---|
| End bp | 1000980 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640836306 |
|---|
| Product | TonB-dependent heme/hemoglobin receptor family protein |
|---|
| Protein accession | YP_001372158 |
|---|
| Protein GI | 153010944 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGA CTGGTGGGGT TCACAAACGG TCAATTCTGG CGAGCACGGG GCTTGCTGTC
ATTCTGGTGG CGATGACGTC ACAAGCCTTT GCGCAGGAAC AGAAAGCTTC TGAAGAAGAA
GCTGGCGTCG CGTTGAAGAC GATCACCATT CGCAGAGCGA ACGACGCTCA GGCGCCGACT
TCCGTTGCGG CACCGGTTGG CAGGGTTGAC CGCGAAGAGA TCAATCGTTT CGGCGGCGCG
AAGCTCGACG ACGTGTTGCG CGGCACCGCT GGCGTGTTTA CCTTGCAGAA TGCTTCCAAT
CCCGGCGTTG CGGTCAATAT TCGTGGTTTT GAAGGCTCCG GCCGCGTCAA CATGATGATC
GACGGCGTAC CGCAGAGCTA CCGCAACACC GCGCACGATG CGCAGGGCTA TGCCTATATC
GACCCGAACC TGTTATCTGA AATCGACGTG GCGCGCGGCG CTGTGACGAC CGAAGGCGGC
ACTGGCCTTG CAGGCAGCGT CAATTTCCGC ACCCTCGGCG TCGATGATGT CATTCTGGAT
GGCAAGGACA AGGGCGTCCT CGGCCGCGCT TCCTGGGGTA GCAATGGAAC CGGCTTCTCC
GAAATGCTGG CCGGTGCCGC CCGCGTCAAT TCCATCGGGA TTGTTGCGGC CATCAGCCGT
CACGACTCCA ACGATTACAA GAACGGCGAC GGCGTGACCG TCGAGAAAAC CGGCGAAGAA
CTGACTTCCG GCCTGTTCAA AGCTGAGTTC GGCCTTGGCG AAGACCAGAA GCTGACGCTT
GGTGGCGTGC TCTACAACAA CCACTACGGA ACATATGCGA ACGGCTACCG TCCGGGAACC
TATACGATCT ACGATATGTT CCTGCAGAAC CGCACGTTCT TCGCACAGTA CAACTACAAT
CCGTCCGACA ACGATCTCAT CGGCCTCGAC GTCAACCTCT ACCACAACAG CACATTGCAG
AACTGGGAAG ACGGCAATGG CAGCTTCGTA GGACGGCAGG TTTCGACCGA AACCACCGGC
ATGACGGCCT CGAACACGTC GCGCTTCACC TTCGGCGAAG TGGCGGTCGC GTGGAAGAAC
GGCTTTGAAA TCAACCGCGA CACCGCTGGC GGCACCCAAA CGGGCGTCAA TCCGACGGAT
GCCACATCCA ATCGCGGCGC GGTTTTCTCG GAAGCGACCT GGAATTATCA GGCCCTGCAA
GTCGTTACCG GCCTTCGTTA CGATTATTTC AAGCTCGAAA GCGAAGACAG CTCGATCTCT
AACAGCGATG GCGAATTCAG CCCCAAGGTC ACCGTTGCCT ATAACCTGAC CGACTGGTTG
CAGCCCTACA TCACCTATGC GCATTCCATG CGTTCGCCCA GCCTGCAGGA AACATTCCTC
GGTGGCGTGG CGCATACCGG AACCGGCATG ATGCACGGCA ATCCCAACCT TCGTCCTGAA
AAGCAGCGCG GCTGGGAATT CGGCGTCAAT ATCGCTCGCG ATGGCATCCT GACTGCTGAA
GACGGACTAC GCCTCAAGGC TAATTACTAC ACGATGCGTG TTGAGGATTA CATCACGGCT
GCATCCGACT ACAGCCAGTT CATCAATGTC GACGGCACTT CGACAGTGAA AGGCTTCGAA
CTCGACGCGC GTTATGATGC GGGCTTCGCG TTCGGTGGCA TTGCTTATAC GCATTCCACC
TCTGAACTGC CTGAGCAGAC AGCTGGCATG GGCGCAAACC AGTATTTGCC GGAAGATGTC
GTAACGGTTA CCGCCGGTGC GCGTTTCTTC GAGCGCAAGC TCGAAAGCGG TCTGCGCGTT
CAGCACGTTT CGAGCGGCAA AAGCATCAGC GGAAACGACA CCGATCCCTA CACGCTGGTC
GACGTCTTCG CGAAATACAA GTTCACCGAA ACGGTCGATC TTTCGCTTCA GGTGCTGAAC
ATCGCCGACA AGGAATATAC CCCTGCCCTC AGCACTTATG GTTCTGGTCG CGGACGTACA
TTCCTCGTCT CGACACAGTT CCAGTTCTAA
|
|---|
| Protein sequence | MRATGGVHKR SILASTGLAV ILVAMTSQAF AQEQKASEEE AGVALKTITI RRANDAQAPT
SVAAPVGRVD REEINRFGGA KLDDVLRGTA GVFTLQNASN PGVAVNIRGF EGSGRVNMMI
DGVPQSYRNT AHDAQGYAYI DPNLLSEIDV ARGAVTTEGG TGLAGSVNFR TLGVDDVILD
GKDKGVLGRA SWGSNGTGFS EMLAGAARVN SIGIVAAISR HDSNDYKNGD GVTVEKTGEE
LTSGLFKAEF GLGEDQKLTL GGVLYNNHYG TYANGYRPGT YTIYDMFLQN RTFFAQYNYN
PSDNDLIGLD VNLYHNSTLQ NWEDGNGSFV GRQVSTETTG MTASNTSRFT FGEVAVAWKN
GFEINRDTAG GTQTGVNPTD ATSNRGAVFS EATWNYQALQ VVTGLRYDYF KLESEDSSIS
NSDGEFSPKV TVAYNLTDWL QPYITYAHSM RSPSLQETFL GGVAHTGTGM MHGNPNLRPE
KQRGWEFGVN IARDGILTAE DGLRLKANYY TMRVEDYITA ASDYSQFINV DGTSTVKGFE
LDARYDAGFA FGGIAYTHST SELPEQTAGM GANQYLPEDV VTVTAGARFF ERKLESGLRV
QHVSSGKSIS GNDTDPYTLV DVFAKYKFTE TVDLSLQVLN IADKEYTPAL STYGSGRGRT
FLVSTQFQF
|
|---|
| |