Gene Oant_3558 details

Gene Information

• Locus tag: Oant_3558
• ID: 5381418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009668
• Strand: -
• Start bp: 926948
• End bp: 928909
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640836240
• Product: ABC transporter related
• Protein accession: YP_001372093
• Protein GI: 153010879
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.906345
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATA CGCCGCTTCT CTCGCTCAAG GGCGTTTCCC GACAGTATCC GTCAGGTGAC 
GACTTCACGA CGGTTCTGAA CCATGTGAAC CTGACCATCG AGCGCGGAGA GATGGTGGCG 
ATCATTGGCG CGTCCGGTTC GGGCAAATCC ACGCTGATGA ATATTCTCGG CTGTCTGGAT 
CGTCCGTCGG AAGGCGAATA TCTGATTTCC GGTCGCGCTA CGTCGGAACT TGAAGCTGAT 
GAGCTGGCAC AATTGCGGCG TGAGCATTTC GGTTTCATTT TTCAGCGCTA TCATCTGCTT 
GGTGAACTGG ATGCCGTGGG CAATGTCGAG ATCCCGGCCA TTTATGCAGG CCAGAAAAAG 
GCGGAACGGC GCGAAAAGGC TGAAATGATC CTTCAGCGGC TTGGTATGGG TGAACGCACC 
CATCACCGGC CCAGTCAGCT TTCCGGGGGC CAGCAGCAGC GCGTTTCCAT CGCCCGCGCC 
CTCATCAACG ATGCTGATGT TATTCTGGCG GACGAGCCAA CGGGTGCGCT CGACAGCCAT 
AGCGGCGAGG AAGTCCTTGG CATCCTTCAG GAACTGAACC GCGAAGGACG CACCATCGTC 
ATCGTCACGC ATGACCGGCA GGTTGCAGCG CGGGCGCAGC GCATCATCGA AATTCGCGAT 
GGCGAAATCA TCTCCGATAC ACGTAACGGT GAGACCGAGC GGCGAGTGAT GTCTGTGCCG 
GTTGAGCAGC AGCAGGCCAA GCCGAGGCTA CTGGCCGGGC TTCGCGACCG CTTCAACGAG 
GCATTCGCAA TGGCGCTCCG GTCGATGAAT GCGCATCGGC TGCGCACGTT TCTGACGATG 
CTCGGCATCA TTATTGGCAC GGCATCGGTC GTCTGCGTCG TGGCGCTGGG ACAAGGGTCA 
CAGCGGCAGA TTCTGGAGCG GATCAGCGAT CTTGGCACCA ATACGCTCTA CATCAGTCCC 
GGCAGGGGAT TTGGTGACCT GAAAGCCGCG CAGATTACAA CACTCAATCT GGACGATGCC 
AAGGAGATCG CGAAACTGCC CTATGTGGTG GCTGCGACGC CATCCGGTTC GACAAGTTCC 
ACGATCCGTG TCGGCGACAA AGAAGTCAGC GTTTCGGTGA ATGGTGTGGG TGCGGAATAT 
TTCGTCACAC GCAACAGCAA GTTGCTCGAA GGCCGGTTTT TCGATCAGCG CAATGTCGAT 
GATCTGGAAC AGGTGGCTAT GGTTGATGAA ACAGCCAAGA CGACACTCTT TCCCCATGAA 
GTAGGCTCTG TCATCGGCAA GATCATCCTT TTGAACAAAG TGCCAGTGCG CATTGTCGGT 
GTCGTCAAGG CCGAGGAACG CGGACCGGGT GGCGCGCAGA CGCTTGAAGT CTACCTGCCC 
TACACGACTG TGCAGACACG CATGACCGGC TCACGTTCAT TGCAGATGAT CCTCGTTCGC 
GTCGCCGACA CAATGGACCC GTCGGAAGCC GAAAAACTGA TTACGGCCTT CCTGACCAAA 
CGGCATGGCG AGAAGGACTT CTCAGTCTTC AATACCGACA GCCTGCAAAA GACCATTCAG 
GCCACCACAG CGACGCTTGC CCTTCTCGTG TCCAGCATTG CAGGCATATC GCTTTTTGTC 
GGCGGCATCG GTGTCATGAA CATCATGCTT GTCGCCGTAT CGGAAAGAAT CAACGAGATC 
GGTGTCCGCA TGGCCATTGG CGCACGCCAG AGCGATATCT TGCAGCAGTT CCTGATCGAG 
GCGATTCTCG TTTGTCTGAT CGGTGGCGTG CTTGGTGTTC TCATCGCTGC CGGATTCGGC 
CTGCTGTTTG CGCAGTTCAG TTCGATGTTC CAGCTCATCT ATTCGCCCGC CTCCATCGTG 
GTTGCGCTTG TCTGCTCGAG CTTGATCGGC ATCGGATTCG GCTTTATTCC GGCTCGCAAC 
GCCTCCAAAC TCGATCCGGT CGTCGCCCTC GCACGGGACT GA 

 

Protein sequence

MSDTPLLSLK GVSRQYPSGD DFTTVLNHVN LTIERGEMVA IIGASGSGKS TLMNILGCLD 
RPSEGEYLIS GRATSELEAD ELAQLRREHF GFIFQRYHLL GELDAVGNVE IPAIYAGQKK 
AERREKAEMI LQRLGMGERT HHRPSQLSGG QQQRVSIARA LINDADVILA DEPTGALDSH 
SGEEVLGILQ ELNREGRTIV IVTHDRQVAA RAQRIIEIRD GEIISDTRNG ETERRVMSVP 
VEQQQAKPRL LAGLRDRFNE AFAMALRSMN AHRLRTFLTM LGIIIGTASV VCVVALGQGS 
QRQILERISD LGTNTLYISP GRGFGDLKAA QITTLNLDDA KEIAKLPYVV AATPSGSTSS 
TIRVGDKEVS VSVNGVGAEY FVTRNSKLLE GRFFDQRNVD DLEQVAMVDE TAKTTLFPHE 
VGSVIGKIIL LNKVPVRIVG VVKAEERGPG GAQTLEVYLP YTTVQTRMTG SRSLQMILVR 
VADTMDPSEA EKLITAFLTK RHGEKDFSVF NTDSLQKTIQ ATTATLALLV SSIAGISLFV 
GGIGVMNIML VAVSERINEI GVRMAIGARQ SDILQQFLIE AILVCLIGGV LGVLIAAGFG 
LLFAQFSSMF QLIYSPASIV VALVCSSLIG IGFGFIPARN ASKLDPVVAL ARD