Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3458 |
Symbol | |
ID | 5382314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 816648 |
End bp | 817394 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640836140 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001371993 |
Protein GI | 153010779 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.463794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGAT ATTCCTATCA ACTTTACAGC TCCCGCAACT TCCAACCGTT GGAACGCACG CTCACCATGC TGCGGGATCT CGGCTATCGT CGGGTGGAAG GCTATGGGGG GATTTATGGT GATCCTGTTC GATTAAAGAA GGACCTCGAC GCATTGGGAC TTTCCATGCC TACCGGACAC TTTGGTCTGG ATATGCTGGA GAACGAAGTC AACCGTGTTC TGGAGATTGC CAAGGTCGCC GATATGAAGG CTATTTTCTG CCCTTATCTC GATGCAGACC GCCGCCCGGA TAGTGTTGCC GGTTGGCAGG AGTTCGGAAA ACGCCTTGCT GTCGCTGGAG AGCATTATCG CAAGGCGGGC TATGCATTTG GCTGGCACAA CCATGATTTC GAATTCCGCC CGTTGGCCGA CGGTTCCGTA CCACAGGAAC ATATCCTCGA TGCTTCGCCC GATCTTGCAT GGGAGGCGGA TATTGCGTGG ATTATCAAAG GCGGTGCCGA CCCGCTTGAA TGGATCAGGC GCTATGGCGA CCGAATCCTT GCGGTCCATG TCAAGGATAT CGCCATAGCC GGTGAAAAAA CCGACGAAGA CGGCTGGGAA GACGTCGGAC ATGGCACTGT GGACTGGGCT GAATTGTTTA CGGCTTTGCG CAAGACGCCC GTCCGCTATT TCATCATGGA ACACGATAAT CCGTCGGACG ACACCCGATT TGCGCGCCGT TCCATCGAAA CCGTAAAGAA TTTCTGA
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Protein sequence | MNGYSYQLYS SRNFQPLERT LTMLRDLGYR RVEGYGGIYG DPVRLKKDLD ALGLSMPTGH FGLDMLENEV NRVLEIAKVA DMKAIFCPYL DADRRPDSVA GWQEFGKRLA VAGEHYRKAG YAFGWHNHDF EFRPLADGSV PQEHILDASP DLAWEADIAW IIKGGADPLE WIRRYGDRIL AVHVKDIAIA GEKTDEDGWE DVGHGTVDWA ELFTALRKTP VRYFIMEHDN PSDDTRFARR SIETVKNF
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