| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3436 |
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| Symbol | |
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| ID | 5382909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 781409 |
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| End bp | 782824 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836118 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001371971 |
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| Protein GI | 153010757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.360287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGTA AATCAGTCAT TTCTCGTCGT GTTTCCAGCC TGCTCGCGCC GCGAGCAGAA
TCATCGGATC ACAAAACCCT CACCCGTTTC GGCAGTGTCA AACCTGAATG GGCGCTTGAT
CTGGAACGAG AGGATTCGAG GTCACCGCTG CGCGGTCTCA TCATTGCAGG ACTCGCCACA
ATCGGTGTCG CTTTCGGTGG ATTCTTCGCC TGGGCTTATT CCGCTAATCT GGGAAGTGCG
GCAGTCGCAA TGGGCACGGT GATTGTCGAT TCCAAGCGCA AGACAATCAG CCATCTCGAA
GGCGGCATTC TTGATCGTCT GCTCGTGCAG GAAGGCGACA TAGTCAAGGT TGGCCAACCC
CTGCTCCGGC TTGACGACAC CAAGGCACGC TCTGATCTCC AGTCTCTGGA AAGCAGGCGC
ATCGGCCTGA TCGCAAAACT GGCCCGCCTG CGCGCCGAGC AATCCGGCGA AAAAGAAATC
AGTTTTCCGG AAGGTTTCGC CGATGGCGGT GAGAATGCAC AGAACGCCAT TCGCGCCGAG
AATATCTTTT TCCAGAAAAG ACTCGCGCAG AAACTGAGCA AGATCGACAT CCAGCAGAAG
ACCATCGAGC AATATACTGA ACAGGCCAAG GCCTCCACAT CGCAGATAGC GGCAACCGAC
CGACAGATCG AGCTTATCAG CGAACAGCGC AAGGCGATTG CCAGCCTTGT TGAAAAAGGC
TTTGCCCAGA AATCGAAACT CACGGAAATC GATACACGCC TCAGCCAGCT TGCGGGCGAC
CGCGGCGAAT ATGCCGGTGA CAAGGCGAAA GCCGAACAGG CGAAAGCCGG TGCGGAGTTC
GCCCTGACAG GGATCGAAAG CGATCTCCAG TCGGAGATCG CAGGAGAGAT CACCTCCAGC
CAGGTCGAAC TTTCAGATGT GCAGGAACGT ATCGTTGCCG CCAAGGACGT GATGCGTCGC
GTGGAAGTTC GCTCGCCGCA GGATGGTATC GTCGCGAACA TCCGGCTGCG CACACCGGGC
GGCGTCATCG CGCCGGGCGA GGCGATCATG GATATCGTTC CTGAGAACGA ACCTTTGGTC
GTTGAAATGA AGATCAGCCC GCGTGATATC GACAGCATCT CGGTTGGCGC AGGCGCACAG
ATCCGGTTAA CTGCCTACAA TCAGCGCTCA ATGGCGCCGC TAGACGGCAA ACTGACCTAT
ATTGCCGCCG ATCAGTCCCT CGATGAAAAG ACAGATACCG CATTTTTCGT CGCGCGAGCC
GAAATTACTC CGGCGTCACT TGCCGCAAAT CCGACTGCCC GACTTTATCC TGGCATGCCC
GCCGAGATAA TCATCGTGCA CAAGGAGCGT CGCGCCATCG ATTACTTGGT CTCACCTATC
ACAGATAGTT TGAACCGGGC ATTCCGTGAA GATTAA
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| Protein sequence | MMGKSVISRR VSSLLAPRAE SSDHKTLTRF GSVKPEWALD LEREDSRSPL RGLIIAGLAT
IGVAFGGFFA WAYSANLGSA AVAMGTVIVD SKRKTISHLE GGILDRLLVQ EGDIVKVGQP
LLRLDDTKAR SDLQSLESRR IGLIAKLARL RAEQSGEKEI SFPEGFADGG ENAQNAIRAE
NIFFQKRLAQ KLSKIDIQQK TIEQYTEQAK ASTSQIAATD RQIELISEQR KAIASLVEKG
FAQKSKLTEI DTRLSQLAGD RGEYAGDKAK AEQAKAGAEF ALTGIESDLQ SEIAGEITSS
QVELSDVQER IVAAKDVMRR VEVRSPQDGI VANIRLRTPG GVIAPGEAIM DIVPENEPLV
VEMKISPRDI DSISVGAGAQ IRLTAYNQRS MAPLDGKLTY IAADQSLDEK TDTAFFVARA
EITPASLAAN PTARLYPGMP AEIIIVHKER RAIDYLVSPI TDSLNRAFRE D
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