Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3404 |
Symbol | |
ID | 5382402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 743080 |
End bp | 743961 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640836086 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001371939 |
Protein GI | 153010725 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.729223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTAC GTCATCTGCG TTATTTTCTG GCCGTGGCCG AAGAGGGCAA TTTTACCCGC GCGGCTGCGA AGCTCGGTAT CGGTCAGCCG CCGCTCAGCC AGCAGATACG CGACCTCGAG AACGAGATCG GGGTGGCGCT GTTTCATCGC GTGCCGCATG GAGCCGAACT GACGGCAGCC GGCACGGCTT TTCTTGGTGA AGCGAAGGCC TCCCTTGCCG CCGCCGAGAA GGCGAAGCTT GTAGCGCAGG GCACGGCGCG TGGAGAAACC GGCAGGCTCG CGCTGGGTTT CACTGCATCG TCCGCGTTCA ACCCGACCGT CAGCGGTACA ATCCGCAAGT TTCGGGCCAG ATGGCCCGAT GTCCGGCTGA CCCTGACGGA GATGAACAGT CATCTTTTGA TGGAAAAGCT GGTCAGGGGA GAGGTGGACG CTGCCTTCAT CCGGCCCGGA TTGGAAAATT CCAAGGACGT ACGCATGAAG CGGCTGGCTG ATGAGCCGAT GCTGATCGCC CTGCCGAGCC ATCATCCGCT TGCCGTTCAT CCCAAGCTGC CGATTTCAGC TCTGGCAAAT GAGGCATTCG TGCTTTTCCC GCGCATTGTG GGGCTTAGCC TTTACGACGA TGTGGTTGAG GCTTGCCGGA ATGCGGGCTT TGAAATGATC GTCGCGCAGG AAGCGCCGCA GATGCCATCC GTCGTCAATC TGGTCGCAGC CGATCTGGGC GTCTCGATTG TTCCAACCGC CATTGCGCAG ATCAAGCTGG CCGGGGTGAC TTATCGTCCA ATCGAAGGCG AGCCTCTTCT GGCGCGGTTG GGGCTGGTTT CGATGAAGAA CAACCGGTCG CCGCTCATCG ATAATCTTAC TAGCCTGTTA CCGGATCAGT GA
|
Protein sequence | MELRHLRYFL AVAEEGNFTR AAAKLGIGQP PLSQQIRDLE NEIGVALFHR VPHGAELTAA GTAFLGEAKA SLAAAEKAKL VAQGTARGET GRLALGFTAS SAFNPTVSGT IRKFRARWPD VRLTLTEMNS HLLMEKLVRG EVDAAFIRPG LENSKDVRMK RLADEPMLIA LPSHHPLAVH PKLPISALAN EAFVLFPRIV GLSLYDDVVE ACRNAGFEMI VAQEAPQMPS VVNLVAADLG VSIVPTAIAQ IKLAGVTYRP IEGEPLLARL GLVSMKNNRS PLIDNLTSLL PDQ
|
| |