Gene Oant_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3400 
Symbol 
ID5382398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp738690 
End bp740159 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content57% 
IMG OID640836082 
Productamino acid permease-associated region 
Protein accessionYP_001371935 
Protein GI153010721 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCG AAACCATGAA AGCCACCCCG GCCGAACGCG AAGTGTTCGT TGAAGAGGAC 
CGCGGTTATC ACAAGGCCCT GAAACCGAGG CAGATCCAGA TGATCGCCAT CGGCGGCGCG
ATCGGTACCG GGCTCTTTCT CGGTGCAGGC GGACGCCTCG CAATGGCAGG TCCGGCCCTG
GTCTTCGTCT ATGCCCTCTG CGGCTTCTTT GCCTTTCTGG TGCTGCGTGC ACTGGGCGAG
CTGATCATGC ATCGCCCCAG CTCCGGTTCC TTCGTCTCCT ATGCCCGCGA ATTCTACGGT
GAGAAACTGG CGTTCGTGGC AGGCTGGATG TACTGGCTCA ACTGGGCCAT GACGTCGGTC
GCGGACGTAA CGGCTGTTGC GCTCTACATG AATTTCTTCA AGCACTATGT GCCGTGGCTG
CAAGGCATTG ACCAATGGGT GTTCGCACTG ACGGCCCTTA TCATCGTGTT GTCGATGAAC
CTTCTGTCGG TGAAAGTGTT TGGCGAGCTG GAATTCTGGT TCAGTCTCGT CAAAGTCATT
GCGCTCGTGA CCTTTCTGGT TGTCGGCATT TACTTCGTTG TCTCCGGCAC GCCGATTGAC
GGTCATTCGG CTGGCTTCAG CATCATCACG AATAGCGGAG GCCTTTTCCC GAACGGTATA
TTGCCTGCAT TCATCATCAT ACAGGGTGTG GTTTTCGCTT ATGCATCCAT CGAGTTGCTG
GGCACCACAG CGGGAGAAAC CGAAGACCCG CGCAAGGTCA TGCCCCGCGC AATCCGCACC
GTGGTCTTCC GCCTTCTCGT CTTTTATGTA GGTTCTGTTC TGCTGCTCTC GCTGCTTCTT
CCCTACACAG CCTATTCTGC TGGCGAGAGC CCGTTTGTGA CCTTCTTCGG CAAGATCGGC
GTCGAAGGTG CGGATATCAT CATGAACCTC GTCGTCCTGA CCGCGGTTCT GTCGTCGCTG
AATGCCGGGC TTTATTCCAC CGGGCGCATC CTGCACTCCA TGGCCATTTC CGGCTCGGCG
CCAGCCTCAC TGGCCAAGAT GAACAAGAAC GGCGTTCCCT ATATGGGCAT CGCCGTCACC
GCGGTCGTCA CTGTCATCGG TGTTGTTCTC AATGCTGTCG TGCCTGCGGC AGCCTTTGAA
ATCGCGCTTA ATCTCTCCGC GCTCGGCATC ATCACGGCAT GGGGCGTCAT CGTCCTTTGC
CAGCTGAAAC TTTGGCATCT TGCGCGTCGC GGCGAAATCG TGCGCCCGGA TTTCCGCATG
TTCGGTGCAC CTTACACCGG CATCCTCACA CTCGCATTCC TGCTTGGCGT GCTTGTCCTG
ATGGCACTCG ACTATCCAGT CGGCACATGG ACGATTGCTT CGCTGGCAAT CATCGGCCCT
GCCCTCATCC TCGGCTGGTA TATGATGCGT GAACGCATCC ATCGACTTGC TACCGAACGT
GCTGTAGACG CCAGCATTCC CGGTAAGTGA
 
Protein sequence
MPIETMKATP AEREVFVEED RGYHKALKPR QIQMIAIGGA IGTGLFLGAG GRLAMAGPAL 
VFVYALCGFF AFLVLRALGE LIMHRPSSGS FVSYAREFYG EKLAFVAGWM YWLNWAMTSV
ADVTAVALYM NFFKHYVPWL QGIDQWVFAL TALIIVLSMN LLSVKVFGEL EFWFSLVKVI
ALVTFLVVGI YFVVSGTPID GHSAGFSIIT NSGGLFPNGI LPAFIIIQGV VFAYASIELL
GTTAGETEDP RKVMPRAIRT VVFRLLVFYV GSVLLLSLLL PYTAYSAGES PFVTFFGKIG
VEGADIIMNL VVLTAVLSSL NAGLYSTGRI LHSMAISGSA PASLAKMNKN GVPYMGIAVT
AVVTVIGVVL NAVVPAAAFE IALNLSALGI ITAWGVIVLC QLKLWHLARR GEIVRPDFRM
FGAPYTGILT LAFLLGVLVL MALDYPVGTW TIASLAIIGP ALILGWYMMR ERIHRLATER
AVDASIPGK