Gene Oant_3397 details

Gene Information

• Locus tag: Oant_3397
• ID: 5382375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009668
• Strand: +
• Start bp: 736401
• End bp: 736952
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640836079
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_001371932
• Protein GI: 153010718
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTCTG GCACGCCGCA AAGCCATGAG GCCGATGTGA GCCATCCCGC TCCCGAAAGT 
TTCGAGGGCC AGCTTCTGGC CCTCCTGCCG GTCATGCGGC GTTATTCGCG CAGCCTTGCC 
AAGTCCGATG CCGAAGGCGA GGACCTTTTG CAGGATTGCG TGGCGAAGGC GTTGTCGCGG 
CGCGGCCAGT GGCGTGGCCT CAATCTGCGT GGGTGGATAC TCACGATGAT GACCAATCTT 
TACCGCAATG GCTACAAAAG CCGCGCCCGG ACCCGACATG AAACGCTGGA TGCCACTGAA 
AATGTCAGTG TCGCTGCGAC GGAGACGGAT CCGTTCCAGC TGCAGCAGCT TGAAGAGGCG 
ATCAACACCC TGCCGGACGA TAACCGCGCG GTGCTGATGC TCATCGTCGT CGAAGGCTAC 
AGCTATGGCG AGGCGGCAGA AATGCTGGGC ATACCTGTCG GAACGGTCAT GTCGCGGCTT 
TCACGGGCAA GACATCGCGT TGCCGAACAT ATGAGCGGCT CGAATATTGT AACGCTTCGG 
AGAAACCGAT GA 

 

Protein sequence

MESGTPQSHE ADVSHPAPES FEGQLLALLP VMRRYSRSLA KSDAEGEDLL QDCVAKALSR 
RGQWRGLNLR GWILTMMTNL YRNGYKSRAR TRHETLDATE NVSVAATETD PFQLQQLEEA 
INTLPDDNRA VLMLIVVEGY SYGEAAEMLG IPVGTVMSRL SRARHRVAEH MSGSNIVTLR 
RNR