| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3218 |
|---|
| Symbol | |
|---|
| ID | 5381535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 538747 |
|---|
| End bp | 540105 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640835901 |
|---|
| Product | conjugal transfer protein TrbL |
|---|
| Protein accession | YP_001371755 |
|---|
| Protein GI | 153010541 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
|---|
| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.191716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGAA CGGGGGTCAT CGATAATTTT CTCGGCATCT TCACCAGCTA TATCGACTCC
GGCTTCGGCC TGCTCGGCGG CGAGGTGGCG TTTATCGCCA CGACGCTGAT CGTCATCGAC
GTGACGCTCG CCGCACTGTT CTGGGCCTGG GGCGCCGACG GCGACATCAT TGCGCGGTTG
GTGAAAAAGA CGCTGTTCGT CGGCGTCTTC GCCTATCTCA TCAGCAACTG GAACAATCTC
GCACGGATCG TCTTCGAGAG CTTCGCCGGG CTCGGGCTCA TGGCGTCCGG CACTGGCTTC
TCGGTTGCCG ATCTGCTGCG CCCCGGCCGC GTTGCCCAAA CCGGGCTGGA CGCCGGTCGC
CCGCTGCTGG AATCTATTTC GGACCTGATG GGCTGGATCG CCTTCTTCGA GAACTTCATC
CAGATCGCGT GCCTGTTGTT CGCCTGGGCG CTGGTGGTGC TGGCCTTTTT CATCCTGGCA
ATCCAGCTTT TCGTCACGCT GATCGAGTTC AAGCTGACCA CGCTGGCCGG CTTCGTGCTG
ATTCCATTCG GCCTGTTCGG CAAGACCGCC TTCATGGCCG AGCGGGTGCT GGGCAATGTG
ATCTCCAGCG GTATCAAGGT GCTGGTCCTC GCCGTCATCA TCGGCATCGG CTCCACGCTC
TTCGGCCAGT TTACCGCAGG CTTCGGCGGT GCGACCCCGA CAATCGACGA CGCCATGGCG
ATCGTGCTGG CAGCCCTTTC CCTTCTCGGC CTCGGCATCT TCGGCCCCGG CATCGCCACC
GGCCTCGTCT CCGGAGGCCC GCAACTCAGT GCCGGCGCCG CCGTCGGGAC TGGCCTTGCG
GTTGGCGGCG CTGCGATCGC AGCCGGTGGC GCGACCATGC TCGCGGCGCG GGGTGGCGCA
GCCGCACTCT CGGGCGGGGC AGCACTTGCC CGCGGCGGTG CCTCGGCCGC CGGTGCGGCT
TCGTCCGCCT ATACCCTCGG CTCCTTGGGC GGGTCCGGCA CGGCCGGGGT CGCCTCCGGC
CTTGGCGGTG TGGCGCGCGC CGGAGCCTCC GCCGCCGTTT CACCACTCAA GCGCGCCGCC
TCCCGCGCCA GCGACAGCCT GAAATCCAGC TATTCCGATG GTGCGAAAGC CGGATTCGCG
GCATCCGGCG GCACGTCGAC CATGGGCACC GTCGGCAGAG ATTCGTCGCC TGCGCCGTCA
ACCCCCTCAA CCCCTGATGG GCCGCCGGCC TGGGCGCAGC AGATGCGGCG TGGCCGGGCC
ATGAGCCACG GCGTCACGGC TGCTGCTCAT GCTGTCCGAT CCGGCGACAG CCACGGCGGC
GGCTCCTCCG TCAGCCTTTC CGAAAGTGAC CGCACATGA
|
|---|
| Protein sequence | MGGTGVIDNF LGIFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWAW GADGDIIARL
VKKTLFVGVF AYLISNWNNL ARIVFESFAG LGLMASGTGF SVADLLRPGR VAQTGLDAGR
PLLESISDLM GWIAFFENFI QIACLLFAWA LVVLAFFILA IQLFVTLIEF KLTTLAGFVL
IPFGLFGKTA FMAERVLGNV ISSGIKVLVL AVIIGIGSTL FGQFTAGFGG ATPTIDDAMA
IVLAALSLLG LGIFGPGIAT GLVSGGPQLS AGAAVGTGLA VGGAAIAAGG ATMLAARGGA
AALSGGAALA RGGASAAGAA SSAYTLGSLG GSGTAGVASG LGGVARAGAS AAVSPLKRAA
SRASDSLKSS YSDGAKAGFA ASGGTSTMGT VGRDSSPAPS TPSTPDGPPA WAQQMRRGRA
MSHGVTAAAH AVRSGDSHGG GSSVSLSESD RT
|
|---|
| |