Gene Oant_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3216 
Symbol 
ID5381533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp537657 
End bp538439 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID640835899 
Productconjugal transfer protein TrbJ 
Protein accessionYP_001371753 
Protein GI153010539 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5314] Conjugal transfer/entry exclusion protein 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.377133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA CAAAGACCCG GATTTCCCGC ATGGCCAGCG CTTCGGCGCT CGCCCTTTCG 
CTTGCCGCGC CGCTGGCGCT CGCGCCGGAC TTCATCACCC CGGCCCATGC CTTCTTCGGC
GGGTTCGGCC GGATCGTCTA TGATCCGACC AACCACGCGG AGAATCTGCT GACCGCCGCC
CGTACGCTGG AGCAGATCAA CAACCAGATC ACCTCGCTTC AGAACGAGGC GCAGATGCTG
ATCAACCAGG CCCGCAATCT CGCGAGCCTG CCTCACAGCT CGCTTCAGGC GCTTCAGCAG
AACGTCCAGC GGACCCAGCA GCTTCTCGGG CAGGCCCAGA ACATTGCGTT CGACGTTCAG
AACATCGATC AGATGTTCCA GCAGGACTAC GGCAAGCTGT CTTTGACCGC GACCGACACC
CAGATGATCG CCGATGCGCG CTCGCGCTGG GAAAACACCG TCGGCGGCCT GCAGGACGCC
ATGCGCGTCC AGGCCGGCGT CGTCGGCAAT ATCGACAGCA ATCGCACGCA AATGTCGGAG
CTTGTCGGCC AAAGCCAGGG GGCGACCGGC GCGCTTCAGG CGACCCAGGC TGGCAACCAG
CTTCTCGCCC TCCAGTCGCA GCAGCTTTCG GACCTGATCG CTGTCATCTC GGCCAATGGC
CGGGCGAATG CCTTGACCGA GGCCGAACGC GCCACGGCAG CCGAACAGGG ACGCATTCAG
CGCGAGCGTT TCCTGACGCC GGGGTCAGGC TATCAGCCCG GCAACGCGCG AATGTTCAAC
TGA
 
Protein sequence
MTRTKTRISR MASASALALS LAAPLALAPD FITPAHAFFG GFGRIVYDPT NHAENLLTAA 
RTLEQINNQI TSLQNEAQML INQARNLASL PHSSLQALQQ NVQRTQQLLG QAQNIAFDVQ
NIDQMFQQDY GKLSLTATDT QMIADARSRW ENTVGGLQDA MRVQAGVVGN IDSNRTQMSE
LVGQSQGATG ALQATQAGNQ LLALQSQQLS DLIAVISANG RANALTEAER ATAAEQGRIQ
RERFLTPGSG YQPGNARMFN