Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3216 |
Symbol | |
ID | 5381533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 537657 |
End bp | 538439 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640835899 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_001371753 |
Protein GI | 153010539 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.377133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCA CAAAGACCCG GATTTCCCGC ATGGCCAGCG CTTCGGCGCT CGCCCTTTCG CTTGCCGCGC CGCTGGCGCT CGCGCCGGAC TTCATCACCC CGGCCCATGC CTTCTTCGGC GGGTTCGGCC GGATCGTCTA TGATCCGACC AACCACGCGG AGAATCTGCT GACCGCCGCC CGTACGCTGG AGCAGATCAA CAACCAGATC ACCTCGCTTC AGAACGAGGC GCAGATGCTG ATCAACCAGG CCCGCAATCT CGCGAGCCTG CCTCACAGCT CGCTTCAGGC GCTTCAGCAG AACGTCCAGC GGACCCAGCA GCTTCTCGGG CAGGCCCAGA ACATTGCGTT CGACGTTCAG AACATCGATC AGATGTTCCA GCAGGACTAC GGCAAGCTGT CTTTGACCGC GACCGACACC CAGATGATCG CCGATGCGCG CTCGCGCTGG GAAAACACCG TCGGCGGCCT GCAGGACGCC ATGCGCGTCC AGGCCGGCGT CGTCGGCAAT ATCGACAGCA ATCGCACGCA AATGTCGGAG CTTGTCGGCC AAAGCCAGGG GGCGACCGGC GCGCTTCAGG CGACCCAGGC TGGCAACCAG CTTCTCGCCC TCCAGTCGCA GCAGCTTTCG GACCTGATCG CTGTCATCTC GGCCAATGGC CGGGCGAATG CCTTGACCGA GGCCGAACGC GCCACGGCAG CCGAACAGGG ACGCATTCAG CGCGAGCGTT TCCTGACGCC GGGGTCAGGC TATCAGCCCG GCAACGCGCG AATGTTCAAC TGA
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Protein sequence | MTRTKTRISR MASASALALS LAAPLALAPD FITPAHAFFG GFGRIVYDPT NHAENLLTAA RTLEQINNQI TSLQNEAQML INQARNLASL PHSSLQALQQ NVQRTQQLLG QAQNIAFDVQ NIDQMFQQDY GKLSLTATDT QMIADARSRW ENTVGGLQDA MRVQAGVVGN IDSNRTQMSE LVGQSQGATG ALQATQAGNQ LLALQSQQLS DLIAVISANG RANALTEAER ATAAEQGRIQ RERFLTPGSG YQPGNARMFN
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