Gene Oant_3193 details

Gene Information

• Locus tag: Oant_3193
• ID: 5382358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009668
• Strand: +
• Start bp: 517524
• End bp: 519509
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640835876
• Product: conjugal transfer coupling protein TraG
• Protein accession: YP_001371730
• Protein GI: 153010516
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3505] Type IV secretory pathway, VirD4 components

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0684551
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCGA CCAAGATCCT CTGGGGACAG ATCACCATCG TCTTCCTCAT CATCCTCGCC 
ACCACCTGGG GCGCGACCCA GTATGTCGCC TCGAGCCTCG GTTATCAGGC GCAACTCGGG 
CCGCCCTGGT TCGTGATGTT CGGCGTGCCG ATCTATTATC CGCCCGCGAT CTTCTGGTGG 
TGGTATTTCT ACGAAGCCTA TGCGCCGCCG ATCTTCGCCA AGGGCGGGAT CATCGCGGCA 
TCGGGCGGCT TCATCGCCAT TGCCGTCGCC ATCGGCATGT CGGTCTGGCG GGCGCGCGAG 
GCGAAAAACG TCGCCACCTA TGGCTCGGCG CGATGGGCCG GGAAAGGAGA GATCAAGGCG 
GCGGGCCTGC TCGATCCCGA TGGTGTTGTT CTCGGCCGTT ACGAGAAGGA CTATCTACGC 
CATGACGGGC CGGAGCATGT CCTGTGCTTT GCCCCGACAC GTTCGGGCAA AGGCGTCGGC 
CTCGTCGTCC CGTCGCTGCT GACCTGGCCG GGGTCGGCCA TCGTCCACGA CATCAAGGGT 
GAGAACTGGC AGCTCACCTC CGGCTTCCGC TCGCAGCACG GCCGCGTGCT GCTCTTCGAC 
CCGACCAACC CGAAATCCTC GGCCTACAAT CCGCTGCTGG AAGTGCGCCG CGGCGAGTGG 
GAGGTGCGCG ACGTCCAGAA CATCGCCGAC ATCCTCGTCG ATCCGGAAGG CAGTCTCGAC 
AAGCGCAACC ATTGGGAAAA GACCAGCCAT TCGCTGCTGG TGGGCGCCAT CCTGCATGTG 
CTTTACGCCG AACCCGACAA GACCCTGGCA GGTGTGGCCA AATTCCTGTC CGATCCGAAG 
CGCCCGGTGG ATTCCACGTT GCGCGCCATG ATGAAGACCG CGCATCTGGG CGAAGCGGGG 
CCGCACCCGG TCGTTGCCAG CGCCGCGCGC GAGCTGCGCA ACAAGTCCGA GAACGAGCGC 
AGCGGCGTGT TGTCGACGGC GATGTCGTTT CTCGGCCTGT ATCGCGATCC GGTCGTGGCC 
GAAGTCACAC GCCGCTCCGA CTGGCGCATC AGCGATATTG TGGGAGGCGA TCAGCCGGTC 
ACGCTTTACC TCGTCGTGCC GCCCTCCGAC ATCAACCGCA CCAAGCCGCT GATGCGATTG 
CTGCTCAATC AGATCGGCCG TCGCCTGACC GAAGACCTGC AGGCGAACGC CGGGCGGCAT 
CGGCTCCTTC TGATGCTGGA CGAGTTTCCG GCGCTGGGCA GGCTCGATTT CTTCGAGACC 
GCGCTGGCTT TCATGGCCGG CTACGGTCTG AAATCATTCC TGATCGCGCA GTCGCTGAAC 
CAGATCGAGA AAGCCTACGG GCCGAACAAC TCGATCCTCG ACAACTGCCA TGTCCGCGTC 
AGCTTCGCCA CCAACGACGA GCGCACGGCG AAACGGGTGT CGGATGCGCT CGGCACCGCC 
ACCGAGATGA AGGCGATGAA GAACTATGCC GGCCATCGCC TGTCGCCCTG GCTCGGGCAC 
CTTATGGTCT CGCGCTCGGA AACCGCGCGC CAGTTGCTGA CGCCGGGCGA GATCATGCAG 
CTTCCCCCAC ATGAGGAGAT CGTCATGGTG GCGGGCATCC CCCCGATCCG GGCGACGAAG 
GCGCGCTATT ACGAGGACGC CCGGTTTCGC GAGCGCGTTC TGTCACCGCC TGAATTGAAA 
GGTCCCGAAG AAACGCGGCC CGACGACTGG ACCAAGCTTC CGATCCCGGC GCGACCGGAA 
GGCGCCACGG ATCACGGCGA CCAGAGAACC AATGACGAAG ATCCGACCGA ATCCGAACGC 
CGATTGCAGC CTGAACTCAG CCGCGTAAAG CCCGTGGAGA AGAAAAAGCC CCTCGAGAAC 
GAATTCGAGA TCGCGCCGCC CGATGAAGTT GAGGAAGAGG CCATGCAAAA TCGGCGCATG 
ATCCGCCAGG TGCAGGGCAT TGCCCGGCAG GTTGCCATGG ACCCGAACGA CGGCATGGAG 
CTGTAG 

 

Protein sequence

MSATKILWGQ ITIVFLIILA TTWGATQYVA SSLGYQAQLG PPWFVMFGVP IYYPPAIFWW 
WYFYEAYAPP IFAKGGIIAA SGGFIAIAVA IGMSVWRARE AKNVATYGSA RWAGKGEIKA 
AGLLDPDGVV LGRYEKDYLR HDGPEHVLCF APTRSGKGVG LVVPSLLTWP GSAIVHDIKG 
ENWQLTSGFR SQHGRVLLFD PTNPKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLD 
KRNHWEKTSH SLLVGAILHV LYAEPDKTLA GVAKFLSDPK RPVDSTLRAM MKTAHLGEAG 
PHPVVASAAR ELRNKSENER SGVLSTAMSF LGLYRDPVVA EVTRRSDWRI SDIVGGDQPV 
TLYLVVPPSD INRTKPLMRL LLNQIGRRLT EDLQANAGRH RLLLMLDEFP ALGRLDFFET 
ALAFMAGYGL KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA 
TEMKAMKNYA GHRLSPWLGH LMVSRSETAR QLLTPGEIMQ LPPHEEIVMV AGIPPIRATK 
ARYYEDARFR ERVLSPPELK GPEETRPDDW TKLPIPARPE GATDHGDQRT NDEDPTESER 
RLQPELSRVK PVEKKKPLEN EFEIAPPDEV EEEAMQNRRM IRQVQGIARQ VAMDPNDGME 
L