| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3192 |
|---|
| Symbol | |
|---|
| ID | 5382327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 515760 |
|---|
| End bp | 517499 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640835875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001371729 |
|---|
| Protein GI | 153010515 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.440164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATG ACAACGAGTT CCGCATCCGT CCGGGCCGTA TCCGCTCGAC CCGCGCGCAA
CAGGCGAGGC CCTTTGTCGC CCAGGCGCTC GCCGCCGCCC AGAAAGCCGG CGGACGCGTC
TCGCGCTCCG GCAAGATCAC CTCGGGCAAC CGCTCACGCT TCGGGCGCGG TCAGCGCGCC
AGCATCCAGG CCAACCGGCT TCTCACCGGA CGCTCGCGCA TCGCCGTCAT CAAGACCCGC
GTGGTTCGCC AAACGGCACG CTCGGCTCCG CTCGGCGCAC ACCTTAATTA TCTGCGCCGC
GATGGCGTGA CCCGCGACGG GGAAAAGGCG CGGATGTTCG GCCCGGAAAG GGACGACATG
GATGTCGGCG CTTTCGCGGA AAAGTGCCAG GACGACAGGC ATCATTTCCG CTTCATCGTC
TCGCCCGAAG ACGCGGTGGA CATGGCCAAT CTGAAGGATC ACGCCCGCGA GCTGATGGGG
CAGATGGAGA AGGATCTCGG CACGCGCCTC GATTGGGTCG CCGTCGATCA CTGGAACACC
GACAATCCCC ATATCCATAT CATCCTGCGC GGCCGCACCG ACGATGGCCA GGACCTGGTG
ATTTCCCGCG ACTACCTCAA GGAGGGCATG CGCGCCCGTG CGCAGGATCT GGTCACGCAG
GAACTCGGGC CCCGCACCGA TCTGGAGATC CACCGCAATC TGGAGCGGCA GGTCGAGGCG
GAACGCTGGA CGCAGCTCGA CCGGCAGCTT GTGCGCGACG CCGGCAAGTC CGGCATCATC
GACCTTGCCC CGCTTCCCGA CCGCCAGCCG GACGAGTTTC ATACTCTGAA GGTGGGGCGG
CTGCGAACCC TTGAAATCCG CGGGCTTGCC GAAGAGATCG GCCTCTCGCA ATGGTTCATC
AAGCCCGAAG CCGAAGCGGT CCTGCGTGAA CTGGGCGAGC GCGGCGACAT CATCAAGCGC
ATGCACCGTG CCCTGACCGA ACGCGGCATC GAACGCGGCT CGGCCAGCTA TGTCCTCGCC
GGCGAAAGCC TTGACGTTCC CGTCATCGGC CGCCTGGTCG AGCGCGGCCT CGACGACGAG
TTGAAGGGCA CCGCTTATGC CGTGGTCGAC GGCACCGACG GGCGGACCCA TCACATCAAG
CTGCCGCATC TCGACGCCGC CGGCGACAGT CCGCCCGGTT CCATCGTCGA GTTGCGATCC
TGGGAGGACC CGCAGGGGCA GCGCCGCGTC GCGCTCGCCG TCCGCGCCGA TCTCGATCTT
GGTGCGCAAG TCGGCGCCTC GGGCGCGACC TGGCTCGACC GGCAGGCCAT CGCCCGCGAT
CCGATCGCGC TGTCGGACAG CGGTTTCGGC GCTGAGGTCC GTCAGGCTCT GGACGAACGC
GCTGAACATC TGATCGGCGA GGGCTTTGCC GAGCGGCAGG GCGGTCGCGT CGTCTTCGCG
CGCCGGCTGC TCAGCACCTT GCGCCAACGC GAACTCGACA ACCTCGGCGA GAAGCTCGCA
ACCGAGACCG GCATGTCCTT CGAGCGCGCA GCCAGCGGCG AATATGTCGC CGGCTCCTAT
CGCCAGCGTT TCGCGCTCGC CTCCGGCCGC TTCGCCATGA TCGACGACGG CCTCGGCTTC
CAGCTCGTGC CCTGGTCGCC CTCTCTCGAA AAACAGATCG GCCGTCACGT CTCCGGCGTA
GCCCGCGATG ATGGCGGCGT AGATTGGGAC TTCGGGCGCA AGCGCTCCCT CGGCCTTTAG
|
|---|
| Protein sequence | MSDDNEFRIR PGRIRSTRAQ QARPFVAQAL AAAQKAGGRV SRSGKITSGN RSRFGRGQRA
SIQANRLLTG RSRIAVIKTR VVRQTARSAP LGAHLNYLRR DGVTRDGEKA RMFGPERDDM
DVGAFAEKCQ DDRHHFRFIV SPEDAVDMAN LKDHARELMG QMEKDLGTRL DWVAVDHWNT
DNPHIHIILR GRTDDGQDLV ISRDYLKEGM RARAQDLVTQ ELGPRTDLEI HRNLERQVEA
ERWTQLDRQL VRDAGKSGII DLAPLPDRQP DEFHTLKVGR LRTLEIRGLA EEIGLSQWFI
KPEAEAVLRE LGERGDIIKR MHRALTERGI ERGSASYVLA GESLDVPVIG RLVERGLDDE
LKGTAYAVVD GTDGRTHHIK LPHLDAAGDS PPGSIVELRS WEDPQGQRRV ALAVRADLDL
GAQVGASGAT WLDRQAIARD PIALSDSGFG AEVRQALDER AEHLIGEGFA ERQGGRVVFA
RRLLSTLRQR ELDNLGEKLA TETGMSFERA ASGEYVAGSY RQRFALASGR FAMIDDGLGF
QLVPWSPSLE KQIGRHVSGV ARDDGGVDWD FGRKRSLGL
|
|---|
| |