| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3017 |
|---|
| Symbol | hisS |
|---|
| ID | 5382261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 322335 |
|---|
| End bp | 323924 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640835694 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001371554 |
|---|
| Protein GI | 153010340 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA AAGCGGACAA GATGAAGGCG CGGTTGCCGC GCGGGTTTGT CGATCGGGTG
CCGGATGATT TGCGCGCCGC TGAAAAGATG ATGGCGACAA TCCGTGAAGT TTACGACCTC
TATGGCTTCG AGCCGGTGGA AACTCCGCTC GTGGAATATA CGGATGCGCT CGGCAAGTTT
CTGCCGGATC AGGACCGCCC GAACGAAGGC GTGTTCTCGT TTCAGGACGA CGATGAACAA
TGGCTGTCGC TGCGCTACGA TCTGACTGCG CCGCTGGCAC GTTTTGTTGC CGAAAACTAT
GAGTCGTTGC CAAAGCCTTA TCGCAGCTAT CGCAATGGTT GGGTGTTCCG CAATGAAAAG
CCGGGACCGG GTCGTTTCCG TCAGTTCATG CAGTTCGACG CTGACACGGT CGGTGCGCCG
AATGTCTCGG CCGATGCCGA AATGTGCATG ATGATGGCCG ACACGATGGA GCGCCTAGGC
ATCAGTCGTG GCGATTATGC GATCCGCGTC AATAACCGCA AGGTTCTTGA CGGTGTGCTG
GATGCTATCG GTCTTGAAGG TGAGGGCAAT GCCGCCAAGC GCCTCAATGT ACTGCGTGCC
ATCGACAAGC TCGACAAGTT TGGACCTGAA GGCGTTCGTC TTCTGCTCGG CGAGGGCCGT
CTTGATGAAA GTGGAGATTT CACTAAAGGC GCAAATCTTG ATGATGAGCA GATCAAGCGC
ATGATGAACT TCATCACAGT CGCGGCACGT GATTACGATG ATATCAGTCA AAGGAAAGCA
ATTGATCCCG TATTTCCTTA CTTCTCTCCC GAAGGTGGGG AACCCATCGG AAAAACGCTT
TTACAAGCTA TCCGGGAAAG CGACTTTAAT AAAAGCTCTA TTATGCTCGA AGGATTGAAA
GAACTCGAAG ATATTCGAGA TTTAGCAATA GCGGCTGGGT ACGATGACGG TCGAATTATC
ATTGATCCTT CTTGTGTGCG TGGTCTTGAA TATTATACGG GGCCGGTTTT CGAAGCGGAA
CTGCAATTCG ACGTTACCAA TGAAGACGGT CAGAAGGTCG TGTTTGGTTC TGTGGGCGGT
GGTGGCCGGT ATGATGGTCT CGTGTCACGC TTCCGCGGCG AGCCAGTACC AGCGACGGGC
ATTTCCATTG GTGTTTCGCG CTTGATGACG GCTTTGAAGA ACCTCGGCAA ACTTGATGTT
TCCGATGTCG TCGGCCCGGT AGTGGTTCTG GTTATGGACA GGGATACAGA AAGCCTTGGC
CGCTATCAGA AGATGGTCTC CGACCTGCGT CAGGCGAGCA TTCGCGCTGA AATGTATGTC
GGCGGGTCCG GCATGAAGGC GCAGATGAAA TATGCTGATC GTCGTGAAGC GCCTTGCGTC
ATCATTCAGG GCTCGCAGGA GCGTGAGGCA GGTGAGGTGC AGATCAAGGA TCTGGTCGAG
GGCAAGCGCC TTTCTGCGGA GATTGAGGAC AATGTAACCT GGCGCGAAAG CCGCCCGGCT
CAGATCACGG CCAAGGAAAA TGGCCTCATT GATGCCGTCC GTGAAATCCT TGTCAGCCAG
GCGCGAGATC GCGCAGAACA GTCGAAGTGA
|
|---|
| Protein sequence | MADKADKMKA RLPRGFVDRV PDDLRAAEKM MATIREVYDL YGFEPVETPL VEYTDALGKF
LPDQDRPNEG VFSFQDDDEQ WLSLRYDLTA PLARFVAENY ESLPKPYRSY RNGWVFRNEK
PGPGRFRQFM QFDADTVGAP NVSADAEMCM MMADTMERLG ISRGDYAIRV NNRKVLDGVL
DAIGLEGEGN AAKRLNVLRA IDKLDKFGPE GVRLLLGEGR LDESGDFTKG ANLDDEQIKR
MMNFITVAAR DYDDISQRKA IDPVFPYFSP EGGEPIGKTL LQAIRESDFN KSSIMLEGLK
ELEDIRDLAI AAGYDDGRII IDPSCVRGLE YYTGPVFEAE LQFDVTNEDG QKVVFGSVGG
GGRYDGLVSR FRGEPVPATG ISIGVSRLMT ALKNLGKLDV SDVVGPVVVL VMDRDTESLG
RYQKMVSDLR QASIRAEMYV GGSGMKAQMK YADRREAPCV IIQGSQEREA GEVQIKDLVE
GKRLSAEIED NVTWRESRPA QITAKENGLI DAVREILVSQ ARDRAEQSK
|
|---|
| |