Gene Oant_2959 details

Gene Information

• Locus tag: Oant_2959
• ID: 5381523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009668
• Strand: +
• Start bp: 259197
• End bp: 260996
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640835635
• Product: ABC transporter related
• Protein accession: YP_001371496
• Protein GI: 153010282
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGC TTCCAGAAAT TTCTGCCGCG CCAACGGCGG TCCGCATGTC ATCATGGCGG 
CTCCTGATGA GCAATCGACT GGCGGCTTTC GGCTTTTTTA TGTTGGTCCT GATCTGCCTC 
GTCATTCTGT TGGCCCCGAT TCTCCCGCTT CCCAATCCTG ACGCGACTTC TCCCGCAATG 
CGATTGAAAC CCGTGTTCAG CGAAGGACAT CTTCTTGGAA CGGATCAGCT CGGGCGCGAT 
ATATTGAGTC GTGTCATATG GGGCACGCGG GTGTCTGTCG CAGTTGGCTT TGCGGCGACG 
CTGATCGCAG CAATCGTCGG TTCTGCCATC GGTCTCGTGG CCGGCTATGC GGGCGGGCGA 
ACTGACAATT TGATGATGCG CGGCATCGAT ATGCTGATGG CATTTCCTTA TATCCTACTG 
GCGCTGGCTA TCGTGGCAGT GCTTGGGCCG GGCCTGATGA ATGCGCTTTA CGCGATTGCG 
GTGGTCAATA TTCCGTTCTT CGCGCGTAAT GTTCGCGGGG TTACGCTTGG TCTCGCGCAT 
CGTGAGTTTA TTGATGCTGC CCGGCTCTCC GGGAAAAGTC CGGTTTCGAT CCTGTTAAGC 
GAAGTGCTGC CCAATGTGCT GCCGGTTATC GTCATTACCA TGTCGACCAC GGCGGGCTGG 
ATGATCCTCG AAACGGCGGG CCTGAGCTTC CTCGGTCTTG GCGCACAGCC GCCGCAGGCC 
GATCTCGGCT CCATGCTTGG TGAGGGGCGG GCACAACTGT TCAATGCCCC GCACGTCTCC 
ATCGTGCCCG GCTTGATGAT CTTCCTTCTG GTCATCAGTC TCAACGTATT GGGAGATGGG 
GTGCGCGATG TTCTCGATCC ACGATTACGC TCAGGTGCGC TGGGTCGGCC AGGCGCGATA 
ACCGATATTG CCAAGGACCG GTCATCGCCC GTGATCAAGG ATAGCGAAAA AGCTCTTTCT 
ATTGCCGGTC TCGAAACGGG CTTCGTCAAT GGTGGGCATT TCACCCCCGC TGTCCGCAAT 
GTTTCACTGG AACTTGAACG CGGCGAATGT CTCGGCCTGA TCGGGGAGAG CGGATCGGGC 
AAAAGCGTGA CCGCCCTGTC AGTAATGGGC CTCGTGGCGT CCCCGCCCGG ACTTATCCGC 
AACGGCGCGA TCTATCTGGG CGACCGGGAC GTTCTTTCAA TGTCTGAAAC CGAGTTGACG 
GCGGCACGGG GCGCAAGAGT TGCTTATGTG TTTCAGGACC CACTGACAAC GTTGCATCCT 
ATGTATCCGG TCGGTCGGCA GGTCGAGGAA GCAATTGCAG CGCATCGGCG GATTGGAGCC 
AGTGAGCGGC GGGAACAGGC GATTGTGCTT CTTGACAAGG TTGGCATTCC AGATGCAGCA 
GAACGGGCCA ATCACTATCC GCACCAGCTT TCAGGTGGCC AGCGTCAGCG TGTCGGCATT 
GCCATGGCTC TGGCCAATGA TCCAGACATC ATCATTGCGG ACGAGCCGAC CACGGCGCTC 
GATGTTACGG TGCAGGCGCA CATTCTCGAG CTGCTACGCG ATCTCCAGCG CGAGCGCGGC 
ATGGCTCTCC TGTTTATCAC CCATGATTTT GGAGTGGTTT CGGAGATTTG CGACCGCGTG 
GCAGTGATGA AAGACGGCGA GATTGTCGAG ACGGGCACGA CATCGGAAGT TCTTTCCAAT 
CCGCAGCACA GCTATACGAA ACGCTTGATA GCCTGCGTTC CCGAACTTGG GCAGGGTGCC 
GACTTTCTGG AACGTGTGGC TGGTCTCTTC AAGCGCGAAA ACGGGAAGGC GGCAGGATGA 

 

Protein sequence

MSALPEISAA PTAVRMSSWR LLMSNRLAAF GFFMLVLICL VILLAPILPL PNPDATSPAM 
RLKPVFSEGH LLGTDQLGRD ILSRVIWGTR VSVAVGFAAT LIAAIVGSAI GLVAGYAGGR 
TDNLMMRGID MLMAFPYILL ALAIVAVLGP GLMNALYAIA VVNIPFFARN VRGVTLGLAH 
REFIDAARLS GKSPVSILLS EVLPNVLPVI VITMSTTAGW MILETAGLSF LGLGAQPPQA 
DLGSMLGEGR AQLFNAPHVS IVPGLMIFLL VISLNVLGDG VRDVLDPRLR SGALGRPGAI 
TDIAKDRSSP VIKDSEKALS IAGLETGFVN GGHFTPAVRN VSLELERGEC LGLIGESGSG 
KSVTALSVMG LVASPPGLIR NGAIYLGDRD VLSMSETELT AARGARVAYV FQDPLTTLHP 
MYPVGRQVEE AIAAHRRIGA SERREQAIVL LDKVGIPDAA ERANHYPHQL SGGQRQRVGI 
AMALANDPDI IIADEPTTAL DVTVQAHILE LLRDLQRERG MALLFITHDF GVVSEICDRV 
AVMKDGEIVE TGTTSEVLSN PQHSYTKRLI ACVPELGQGA DFLERVAGLF KRENGKAAG