| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2878 |
|---|
| Symbol | |
|---|
| ID | 5382744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 167130 |
|---|
| End bp | 168320 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640835554 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001371415 |
|---|
| Protein GI | 153010201 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.247459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGA TCACAGCCCG CCGGGCCCTA TGGGGCGCCG GCCTGAGTAT CCTATTGTCT
GCAGCCGGCG GCGGCGCCAT TCTCTTTGGC GCGCCTCACC TCAAGGCCGA TGCTGCAACC
GATATTTCCG CTCCACCGCC CGCCGTGCCG GTTTCGGTCG CCAAGGCAGA ATCGCGACGC
ATCGTAAGCT GGGAAGAGTT TTCCGGCCGT CTGGAAGCGA TTGACCGGGT AGAAATTCGG
CCGCGTGTCG GCGGCGCCAT CCTGAAAGCC CATTTCCGCG AAGGCGCTCT GGTGAAACAG
GGGGACCTGC TCGTCACCAT CGATCCCGAG CCCTACGCGG CAGCGGTCGA AAAGGCAAAA
GCGCAGGTTT CCGCTGAAGA AGCCCGCGTC GCACTGGCCA AGACCGAACT GGAACGTGGG
CGCCAGCTCG TGACCACCCG TACGATCGCC CAAAGCGGCC TCGACCAGCG CTCCAGCGCC
TATGACGAGA CGCAGGCTAC CTTACGTTCC GCCAAGGCTG CCCTGCGTTC AGCCGAGCTC
GATCTTCAAT ACACCGAAGT ACGCGCACCG ATTTCCGGTC GCGTCGGGCG ACTGGAAGTC
ACGGCAGGCA ATCTCGTTGC GGCAAGTTCC GCCTCGCCGG TCCTGACCAC GCTTGTTTCG
GTCGATCCGA TCTATGCAAG CTTCAGCGCC AATGAGGAAG TCGTTACCAA GGCGCTTGCC
AAGCTTGCAG CCTCGCCTGG CGGAAGCGCC ATCGAGCGCA TCCCTGTCCA GATCGGCACT
GCTTCCGATG AAGGCACCCC GATTTCCGGC CATATCCAGC TGATCAACAA TGAAGTCGAT
GCCACAACCG GCACAATTCG GGTTCGTGCG GCAATCGACA ATCCGGACGG AAGGCTCATT
CCGGGCCAGT TTGTCCGCAT TCGTTTCGGT GAGCCGGAAC CGGATGAAAA ACTGGTGGTG
AGCGACCGGG CGATTTCTTC CGATCAGGAC AAGAAGTTCG TTTTCGTGGT CGGCACGGAT
AACAAGGTTG AATACCGGCA GGTGGTTCTT GGTCGCAATT ATGACGGCCT GCGCATTATC
GAAAGCGGGT TGAAGCCCGG CGAGAATATC GTCGTGAACG GCCTGCAGCG CATTCGTCCG
GGCGTGGTCG TCGTACCGCA ACCGGTAACC GAAACACTTG CCCAGAACTA G
|
|---|
| Protein sequence | MTSITARRAL WGAGLSILLS AAGGGAILFG APHLKADAAT DISAPPPAVP VSVAKAESRR
IVSWEEFSGR LEAIDRVEIR PRVGGAILKA HFREGALVKQ GDLLVTIDPE PYAAAVEKAK
AQVSAEEARV ALAKTELERG RQLVTTRTIA QSGLDQRSSA YDETQATLRS AKAALRSAEL
DLQYTEVRAP ISGRVGRLEV TAGNLVAASS ASPVLTTLVS VDPIYASFSA NEEVVTKALA
KLAASPGGSA IERIPVQIGT ASDEGTPISG HIQLINNEVD ATTGTIRVRA AIDNPDGRLI
PGQFVRIRFG EPEPDEKLVV SDRAISSDQD KKFVFVVGTD NKVEYRQVVL GRNYDGLRII
ESGLKPGENI VVNGLQRIRP GVVVVPQPVT ETLAQN
|
|---|
| |