| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2804 |
|---|
| Symbol | |
|---|
| ID | 5382621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 67909 |
|---|
| End bp | 68808 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640835480 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001371342 |
|---|
| Protein GI | 153010128 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.22661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG CGAGCTTGCG GCGTCTTCAG CTGGCAGTTC TTCTCGGACC GGCGACGCTG
TTCCTGATCG TTTTCTTCGC CATTCCGCTC GCGATCATGG TGGTAACGAG CTTTCTCGCA
CCTGGCCTTT ATGGTGGTGT CGAATGGGAG TTCTATCCTC ATAATTTCGG GCGTATCCTC
GGTTTTGCGG ATCCGGCATT TGAGGAATTC GACCCGATCT ATCTGGCGAT TTTCTTCCGC
TCGGTGAGGA TCGCCATCGT GACGGTCATT GCCGCATTGC TGGTCGCTTA TCCGGCCGCC
TTTTATATCA GCAGGCTTCC CGACAAGTGG AAGAACTTCT GCATCTTCCT CATTACCTTG
CCATTCTTCG CCAGCCTGAT TGTGCGGCTG TTCGTATGGG TGATGATCCT GCGCCCGACA
GGGTTGCTCA ACGAGACCTT GATGTCGCTC GGCATTATCT CGCGTCCCCT CGACATGATC
TATACCGACG GCGCTATCGT GCTGGGCATG GTCTATGTGT TCCTGCCGTT CATGTTCATG
CCTGTCTATG CAAGCATTGA AAAGCTGGAC TGGCGTCTGG TGCAGGCGTC GCTTGATCTG
GGGGCCGGCC CGGTGCGGAC ATTCTTCCGG ATTGTCCTGC CGCTGACCAC GCCCGGCATT
GCTGCCGGTT CGGTAATTGT CTTCATTCCT GCGCTCGGAA ACTTTGTCGT GCCTGCAGTG
CTGGGCGGAG CCAAGGTGAT GATGCTCGGC AATCTGATCG AAGGACAGTT CCTGTCGGCG
CGCAATTGGC CGTTCGGGTC GGCGCTCGCG ATGATGGTGA TGGCCGTCAT GTTGCTGCTG
CTGTTTGGCT ATGTGCTCTT TACGAACCGG CGCAATGCCG CCGAAGCGTT GTCGCGGTAA
|
|---|
| Protein sequence | MNLASLRRLQ LAVLLGPATL FLIVFFAIPL AIMVVTSFLA PGLYGGVEWE FYPHNFGRIL
GFADPAFEEF DPIYLAIFFR SVRIAIVTVI AALLVAYPAA FYISRLPDKW KNFCIFLITL
PFFASLIVRL FVWVMILRPT GLLNETLMSL GIISRPLDMI YTDGAIVLGM VYVFLPFMFM
PVYASIEKLD WRLVQASLDL GAGPVRTFFR IVLPLTTPGI AAGSVIVFIP ALGNFVVPAV
LGGAKVMMLG NLIEGQFLSA RNWPFGSALA MMVMAVMLLL LFGYVLFTNR RNAAEALSR
|
|---|
| |