| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2709 |
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| Symbol | |
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| ID | 5379209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 2842539 |
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| End bp | 2844188 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640835388 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001371250 |
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| Protein GI | 153010035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCGG ATTTCGTCAT CATCGGCTCC GGATCTGCCG GATCCGCCAT GGCCTATCGC
CTGTCTGAAG ACGGTCGCTA TTCGGTGATC GTCATCGAAT ATGGCGTGCC CGATGTCGGT
CCGTTGATCC AAATGCCAGC CGCCCTTTCT TTCCCCATGA ATATGGAAAC CTATGACTGG
GGTTTTTCGA CCGAACCGGA GCCGCATATT GGCGGGCGCA GCCTTGTAAC GCCGCGGGGC
AAGGTGCTTG GTGGTTCATC TTCAATCAAC GGCATGGTCT ATGTGCGCGG CCATGCACGC
GACTACGACC ACTGGTCGGA AAGCGGTGCG CGCGGCTGGG CCTATGCAGA TGTACTGCCC
TATTTCAAGC GGATGGAAAA TTCGAGCGGT GGCCAGGAAG GCTGGCGCGG CACCAATGGC
CCGCTTTATA TCCAGCGCGG CAAACGCGAC AATCCCCTGT TCCATGCCTT TGTAGAGGCT
GGCCACGAAG CGGGCTTTGA AGTCACCGAA GACTATAATG GCGAGAAGCA GGAAGGCTTC
GGCCCGATGG AGCAGACGAT CCACAACGGT CGTCGCTGGT CTGCCGCCAA CGCCTATCTG
AAACCCGCCC TCAAGCGCCC GAATGTCAAG CTGGTCAAGG GCCTTGCACG CAAGATCGTG
CTGGAAGGCA AGCGCGCGGT TGGCGTTGAG ATCGAGGCGG GCCGCAGCTT CTCGACCATC
CGTGCGCGGC GTGAAGTCAT CATTGCCGCC TCGTCGATCA ATTCGCCGAA GCTCCTGATG
CTCTCTGGCA TTGGCCCTGC CGCACAACTG AAAGAACACG GAATTGAAGT GGTCGCCGAT
CGCCCCGGCG TCGGCCAGAA CCTGCAGGAC CATCTGGAAG TCTATATCCA GCAGGAATGC
ACGCAGCCAA TCACGCTCTA CTCCAAACTG AACCTGTTCT CGAAAGCGAA GATCGGCGCG
GAATGGCTGT TCTTCAAGAC CGGCGACGGT GCCACCAACC ATTTCGAATC CGCAGCATTC
CTGCGCTCGA AAGCTGGCGT GGAATATCCA GATATCCAGT ATCACTTCCT TCCTGTAGCT
ATACGCTATG ACGGCAAGGC GGCAGCGCAG TCGCACGGCT TTCAGGCCCA TGTCGGCCCG
ATGCGGTCGA AATCACGTGG CAGCGTGACG CTTCGCTCGG CCAATCCACG TGAAAAGCCT
GTCATCAAGT TCAATTATAT GTCGCATGAA GACGACTGGG CCGACTTCCG CCATTGCGTA
CGGCTGACCC GCGAAATCTT CGGACAGGCC GCGTTCAATC CTTATCGGGG AGCAGAAATC
CAGCCGGGCG CACATGTTCA GAGCGACGAT GAAATCGATA ATTTCATCAA GGAACACGTC
GAAAGCGCAT TCCATCCATG CGGCACGTGC AAAATGGGTG CGGTTGACGA TCCAATGGCA
GTGGTCGATG CTGAATGCCG GGTGATCGGT GTCGAAGGCT TGCGCGTTGC GGATTCATCC
ATCTTCCCGC GCATCACCAA CGGCAATCTC AACGGCCCGT CGATCATGGT CGGCGAAAAG
GCCTCCGATC ATATTCTCGG TCGTACGCCG CTCGCGCGCT CCGATCAGGA GCCATGGATC
AATCCGCGGT GGCAAGTATC TGATCGTTAG
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| Protein sequence | MEADFVIIGS GSAGSAMAYR LSEDGRYSVI VIEYGVPDVG PLIQMPAALS FPMNMETYDW
GFSTEPEPHI GGRSLVTPRG KVLGGSSSIN GMVYVRGHAR DYDHWSESGA RGWAYADVLP
YFKRMENSSG GQEGWRGTNG PLYIQRGKRD NPLFHAFVEA GHEAGFEVTE DYNGEKQEGF
GPMEQTIHNG RRWSAANAYL KPALKRPNVK LVKGLARKIV LEGKRAVGVE IEAGRSFSTI
RARREVIIAA SSINSPKLLM LSGIGPAAQL KEHGIEVVAD RPGVGQNLQD HLEVYIQQEC
TQPITLYSKL NLFSKAKIGA EWLFFKTGDG ATNHFESAAF LRSKAGVEYP DIQYHFLPVA
IRYDGKAAAQ SHGFQAHVGP MRSKSRGSVT LRSANPREKP VIKFNYMSHE DDWADFRHCV
RLTREIFGQA AFNPYRGAEI QPGAHVQSDD EIDNFIKEHV ESAFHPCGTC KMGAVDDPMA
VVDAECRVIG VEGLRVADSS IFPRITNGNL NGPSIMVGEK ASDHILGRTP LARSDQEPWI
NPRWQVSDR
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