| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2434 |
|---|
| Symbol | |
|---|
| ID | 5378936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 2562295 |
|---|
| End bp | 2563446 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640835110 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001370977 |
|---|
| Protein GI | 153009762 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.671436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAGA CTCTCGTTCG TCGTTCTGTG AACGCTGCCT TTGTAGCCGT GTTGTCGCCT
TTGCTTCTGC AGCCAAGTCT GGCTCAGCAA GCTCCAACTG GCGCGGCGCC TCCCGTGATC
GTGCGCCAGG TGGAACTGGC ACCTGCGACT GCACCGCTTC GTTTCAACGG GCAGATCGAG
GCGATTGAAG CTGTTGATAT TCAGGCGCGG ATCACCGGTT TCCTGAAGGA AAAGGCGTTC
GAGCAGGGCG CTGCGGTCAA GGCAGGCGAT CTCCTCTTTG AAATTGAGCC AGACCAGATG
CAGGCGGCAG TTATGTCTGC TGAGGCACAG GTTGCACGTG CCGAAGCTGC CCAGAATGCC
GCACGACAAT CATTGTCGCG AACGCGGACG CTCGCCAACC GCAACACCGC TTCGCAAGCT
TCCCTCGACG ATGCACAGGC AGCGTTTGAT ATCGCGACTG CGGATGTGCG GAACGCAGAA
GCCGCGCTCA ACAATGCGCG GCTCAATCTC TCCTATACGC AGGTCAGATC ACCAATCAAC
GGGACAATAG GGCGCTCGCT CTTTACCGTC GGCAACCTCG TTGGCCCGGG CATGGGACCG
CTCGCGCGCA TTGTGCAGCT TGATCCCGTG CGTGTTGTGT TTTCGATCAC GGACCGCGCT
CTGATTGCTA TTCGCCAGAA GGAAGCAGGA GGCGGGACAG TCAATCCCGA AAGCTTCAAG
CTGACTTTGA TGCTGGCCAA CGGAACGCAA TATGGCGAGC GGGGAAACAT CCAGTTCATC
GACAATGAAG TGAGCGCGCA GACCGGCACA GTGGCGGTGC GCGCCCTGTT CGCCAATCCC
AACCATATTC TGGTTCCGGG GCAGGTGGTT GCCGTCAATC TGCTGGATGA GACGGTTGGT
GAGTTGCCGA TTGTTCCCAT GTCTTCCGTG TTGCAGGACC GGCAGGGCAA ATATGTCTAT
GTTCTCAACG AGGGTAATAC GGTTTCCCGG CGTGCGATCG TGACCGGTAC GCGTATCGAC
AATGGCTGGT CGGTTACAGA TGGCCTCAAG GCTGGTGAAA CGATTGTCGT TGAGGGCTTG
CAACGCATCG CCGATGGGCA GGCCGTATCC CCGCGTGACC CGATCTCCGG TACTGCAGGG
GTGGGGCAAT GA
|
|---|
| Protein sequence | MKKTLVRRSV NAAFVAVLSP LLLQPSLAQQ APTGAAPPVI VRQVELAPAT APLRFNGQIE
AIEAVDIQAR ITGFLKEKAF EQGAAVKAGD LLFEIEPDQM QAAVMSAEAQ VARAEAAQNA
ARQSLSRTRT LANRNTASQA SLDDAQAAFD IATADVRNAE AALNNARLNL SYTQVRSPIN
GTIGRSLFTV GNLVGPGMGP LARIVQLDPV RVVFSITDRA LIAIRQKEAG GGTVNPESFK
LTLMLANGTQ YGERGNIQFI DNEVSAQTGT VAVRALFANP NHILVPGQVV AVNLLDETVG
ELPIVPMSSV LQDRQGKYVY VLNEGNTVSR RAIVTGTRID NGWSVTDGLK AGETIVVEGL
QRIADGQAVS PRDPISGTAG VGQ
|
|---|
| |