| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2428 |
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| Symbol | |
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| ID | 5378858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | - |
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| Start bp | 2552488 |
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| End bp | 2554539 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640835104 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001370971 |
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| Protein GI | 153009756 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.865765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGCG AGCAAGAGGC GAAACTGTCG CCCATGGAAC TGGATGAAGC CAAGGCGCGC
GAGCTTGAAG AGAAATTCGA CTCCGAGATT CGTTTTCGCC CGCTGGGGCC GCTCGCAGCC
CGCATCGTTG GCGCGCTGCT GATCGCACTT TCCATCTTCC ACTATTACAC TGCGGGTTTC
GGCCTTCTGT CGGAAATGGT GCATCGCGGT ATTCACCTTT CCTTCGTGCT CGGCCTCGTC
TTTCTTGTTT TCCCGTTTTC CCGCAAGGGA TACGACAAGC CCACCACATC GTCGTGGCTG
AGACCGCTTG GCATTTCCAT TATCGATTGG GCGCTGGCAA TCATCGCGGT CGTGTCCGTC
GCCCACGTTC CAATGATACC GCTCGACGAT CTGGCTTTCC GCGTCGGCAA TCCGACGACC
ACGGATGTCG TTCTCGGCGG CCTTCTCATT CTGGTCCTTC TGGAAGCGAC GCGGCGCTCC
GTCGGCTGGC CACTGCCAAT CATATCGGTC CTGTTCATGC TCTATGCGCT CTATGGGCAG
CATATGCCGG GCATTCTCGT GCATCCCGGT GCAACGGTCA GCCAGCTTGT CGATCATCTT
TATCTGACGA CACAAGGTAT CTACGGTATC GCGCTCGGTG TGGTCGCGAC CTATGTTTTC
CATTTCGTGC TGTTTGGGGT TTTTGCAACC CGCATCGGTC TCGGTCAGCT GTTTCTGGAC
TGCGCGGCCT GGGTAGCAGG CCGTTTCGCA GGCGGTCCGG CAAAGGTCTC CATTTTTGGC
TCCGCCTTGT TCGGCATGAT TTCGGGCTCG TCGGTCGCCA ATACGGTGAC AGTCGGTTCG
CTGACGATCC CGGCGATGAT CCGGCTCGGT TATAAACGCC ACTTTGCCGC TGCCGTGGAA
TCAGCATCAT CGACAGGCGG GCAGATCACG CCGCCGATCA TGGGCGCTGC GGCGTTCCTG
ATGATCGAAT TTCTGAACCT GCCTTACACG ACGATCATTC TGGCAGCCAT CGTGCCAGCC
TTCATGCATT TCTTCGGCGT TCTGATGCAG GTTCATTTCG AAGCCAAGCG CAACGGCTTG
CGCGGCATGA CGAAGGAAGA ACTGCCTGAC CTGAAGGAAG CATTCAAGCG CGACTGGCCG
ACCGTTATTC CGCTGATCGT GCTGATCGGT GTTCTGCTGT CGGGTTATAC GCCTTATCTG
GCTGCGTTCT GGGGCATTAC GCTCTGTATT GCGGTGGGAT TGCTTAATCC GCGCAAGCGC
ATGTCGATAG GCGAGATTTT TGACGGACTG CGCGACGGCG CCAAATATGC GCTCGCCGTT
GGCGCTGCGG CGGCGACCGT CGGCATTATT GTCGGCGTGG TGACGCTTAC CGGCGTTGGC
TTCAAGATTT CCTATATCGT GACGTCGACT GCAGGCCAGC TTGCCACCTA TTTCGGTACC
ATTCTGCCTG CCGCCTGGTT CGGTCCGCAG ACACTGACGC TGCTTTTCAC GCTCGTCATG
ACGGGGATTG TCTGCATTCT GATGGGCTGT GGAATTCCGA CGACAGCCAA TTACATCATC
ATGGCGACAA TTGCCGCGCC CGCGCTGGGG CTGCTGGGTG TTGAGCCCAT TGTGGCTCAC
TTCTTCGTCT TTTATTACGG GGTGCTGGCG GATATCACGC CGCCTGTTGC GCTTGCCGCC
TATGCGGCGG CAGGTATGGC GGGCGCCGAT CCGTTCAAGA CAGGCAATAC GGCGTTTCGG
CTCGGTCTCG GCAAGGTGCT CGTGCCGTTT GTCTTCGTCT TCTCTCCGTC ACTCCTGCTG
GTTACATCGG ACTTCAACTG GCCGGATTTC CTGGTGGCGT TCCTTGGTTG CGCCATAGGC
ATCACCGCTC TGGGTGCCGC ATTGTCAGGT TTCTTCCTGG TGCGGACCAA GGCCTGGGAA
AATGTCCTGA TGATTTTTGC AGCCATTCTT CTGGTCGCGC CGGAGATTTA CTCGTCGATC
GTGGGGCTGC TGCTGCTGGT GCCGGTTGTG GTTCGCCATC TCTCTTCGGT GAGGCAGCCA
CAGGCTGTGT AG
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| Protein sequence | MVSEQEAKLS PMELDEAKAR ELEEKFDSEI RFRPLGPLAA RIVGALLIAL SIFHYYTAGF
GLLSEMVHRG IHLSFVLGLV FLVFPFSRKG YDKPTTSSWL RPLGISIIDW ALAIIAVVSV
AHVPMIPLDD LAFRVGNPTT TDVVLGGLLI LVLLEATRRS VGWPLPIISV LFMLYALYGQ
HMPGILVHPG ATVSQLVDHL YLTTQGIYGI ALGVVATYVF HFVLFGVFAT RIGLGQLFLD
CAAWVAGRFA GGPAKVSIFG SALFGMISGS SVANTVTVGS LTIPAMIRLG YKRHFAAAVE
SASSTGGQIT PPIMGAAAFL MIEFLNLPYT TIILAAIVPA FMHFFGVLMQ VHFEAKRNGL
RGMTKEELPD LKEAFKRDWP TVIPLIVLIG VLLSGYTPYL AAFWGITLCI AVGLLNPRKR
MSIGEIFDGL RDGAKYALAV GAAAATVGII VGVVTLTGVG FKISYIVTST AGQLATYFGT
ILPAAWFGPQ TLTLLFTLVM TGIVCILMGC GIPTTANYII MATIAAPALG LLGVEPIVAH
FFVFYYGVLA DITPPVALAA YAAAGMAGAD PFKTGNTAFR LGLGKVLVPF VFVFSPSLLL
VTSDFNWPDF LVAFLGCAIG ITALGAALSG FFLVRTKAWE NVLMIFAAIL LVAPEIYSSI
VGLLLLVPVV VRHLSSVRQP QAV
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