| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2356 |
|---|
| Symbol | |
|---|
| ID | 5380064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 2480456 |
|---|
| End bp | 2481247 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640835030 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001370899 |
|---|
| Protein GI | 153009684 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCC GCAGTTTTTC ATATAGCGCC CTTGCTATGG CTCTCGGCTT GGCCATTGCC
TGTAACAGCG CCTTTGCTTT CGACCTTAAT GACGATTCCG AAAAGTCGAG AAGCCCGTTT
GAACTCTTCA AGTTCGGCTT TTCCGCATAC AAGAATGGTC ACAAGGACGA AGCGATCAAG
GCACTGCGTT ATGCTGCGGA TCGCGGCCAT CAGGGTGCGA AGTGGAAACT GGCCCGCATG
TATGCCGATG GCGACGGCGT GCCGGAAAAT GACTATGAAG CCTATAAGAT TTTCGAAAAG
ATCGTTCGCG AAGGTTCTGA ACCGGGTTCG GAAAACGACT CTTATGTGGC TGACGCTCTC
GTGGCGCTTG CAGGCTATGT GAAGCGCGGT ATTCCGGGCT CGCCGGTCAA TGCCAATCCG
GGTATGGCAC GCAATCTCTA TGTGCAGGCC GCCTCGAATT TCGGTGATTC CGCTGCCCAG
TTCGAGCTTG GCAAAATGCT GCTCGACGGC GACGGCGGAG AACGCAATTC CATTCAGGCC
GCACGTTGGT TCCAGCTTGC CGCCAAGAAG GGTAATGCCG GTGCGCAAGC CATGCTCGGC
AACATGCTGT TTCAGGCAGG CAAGACCGTT CGTGGCCTCG CTATGATGAC CGCAGCTTTC
GAACGCTGCC CGACCGAAGA TTGCCCATGG ATACGCGATA TGCAGGAGCA GGCATTCTCG
ATTGCCGGCG AAGCGGATCG CCGTAATGCG ATTGCACTCT CCAGTGACTA CGTCACCAAA
GGCGACTTCT GA
|
|---|
| Protein sequence | MRIRSFSYSA LAMALGLAIA CNSAFAFDLN DDSEKSRSPF ELFKFGFSAY KNGHKDEAIK
ALRYAADRGH QGAKWKLARM YADGDGVPEN DYEAYKIFEK IVREGSEPGS ENDSYVADAL
VALAGYVKRG IPGSPVNANP GMARNLYVQA ASNFGDSAAQ FELGKMLLDG DGGERNSIQA
ARWFQLAAKK GNAGAQAMLG NMLFQAGKTV RGLAMMTAAF ERCPTEDCPW IRDMQEQAFS
IAGEADRRNA IALSSDYVTK GDF
|
|---|
| |