Gene Oant_1971 details

Gene Information

• Locus tag: Oant_1971
• Symbol: rplF
• ID: 5380210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 2067362
• End bp: 2067895
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640834639
• Product: 50S ribosomal protein L6
• Protein accession: YP_001370516
• Protein GI: 153009301
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000104023
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA TCGGTAAAAA ACCCGTGCCG GTCCCGGCAG GCGTGACCGC CAGTGTTGAT 
GGGCAGATCG TCAAGGCCAA GGGCGCGAAG GGTGAACTCT CCTTCGTCGT GCACGATGAA 
GTTCTGGTCA AGATGGAAGA TGGCGCTGTC AGCGTCGATC CGCGCGACCA GTCGAAGGAA 
GCTCGTTCGA AGTGGGGCAT GTCCCGCACG ATGATCTCCA ACATTTTTGT TGGCGTGAAG 
GACGGCTTCG AAAAGAAGCT CGAAATCAGC GGCGTCGGTT ACCGCGCTGC CATGCAGGGT 
AAGAACCTGC AGCTTTCGCT CGGCTTCAGC CACGAAGTGG TCTACGACGT GCCTGCTGGC 
ATCACTGTTG CCGTTCCGAA GCCGACGGAA ATCGTCGTCA CCGGTATCGA CAAGCAGCAG 
GTCGGTCAGG TCGCGGCTGA GATCCGCGAA TATCGCGGCC CCGAGCCTTA CAAGGGCAAG 
GGCGTCAAGT ATGCTGGCGA GAAGATCGTC CGCAAAGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRIGKKPVP VPAGVTASVD GQIVKAKGAK GELSFVVHDE VLVKMEDGAV SVDPRDQSKE 
ARSKWGMSRT MISNIFVGVK DGFEKKLEIS GVGYRAAMQG KNLQLSLGFS HEVVYDVPAG 
ITVAVPKPTE IVVTGIDKQQ VGQVAAEIRE YRGPEPYKGK GVKYAGEKIV RKEGKKK