| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1948 |
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| Symbol | |
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| ID | 5378846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 2050676 |
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| End bp | 2054878 |
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| Gene Length | 4203 bp |
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| Protein Length | 1400 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640834616 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001370493 |
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| Protein GI | 153009278 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG AGGTCATGAA TCTTTTCAAT CCTCAGGCTC CGGCACAGAC GTTCGATTCC
ATCAGAATCT CGATTGCCAG CCCTGAGAAG ATTCTGTCCT GGTCATACGG CGAGATCAAG
AAGCCGGAGA CGATCAACTA CCGCACGTTC AAGCCTGAAC GCGATGGTCT CTTCTGCGCG
CGCATCTTTG GCCCGATCAA GGACTATGAA TGCTTGTGCG GCAAGTACAA GCGTATGAAA
TACAAGGGCA TCATCTGCGA AAAGTGCGGC GTGGAAGTCA CGCTCTCGCG CGTTCGTCGC
GAGCGCATGG GCCACATCGA ACTCGCAGCC CCGGTTGCCC ACATCTGGTT CCTGAAGTCG
CTGCCGAGCC GTATCGGCAC GCTCCTGGAC ATGACGCTCA AGGATATCGA GCGCGTCCTG
TACTTCGAGA ACTACATTGT TACCGAACCG GGCCTGACCT CGCTGAAGGA GCATCAGCTT
CTTTCGGAAG AGGAATACAT GATCGCCGTC GATGAATTCG GCGAAGATCA GTTCACGGCT
CTCATTGGTG CTGAGGCTAT CTACGAGCTT CTGGCTTCGA TGGAACTCGA AAAGATTGCC
GCTGATCTGC GCGTTGATCT TGCCGAGACC ACCTCGGACC TGAAGCAGAA GAAGCTGATG
AAGCGTCTGA AGATCGTCGA AAACTTCCTG GAGTCGGGAA ACCGCCCGGA ATGGATGATC
ATGAAGATCG TTCCGGTCAT CCCGCCGGAT CTGCGTCCGC TCGTGCCGCT CGATGGCGGT
CGTTTCGCGA CGTCGGATCT GAACGATCTC TATCGCCGCG TCATCAACCG TAACAACCGT
CTGAAGCGCC TGATCGAACT GCGCGCTCCG GGCATCATCA TCCGTAACGA AAAGCGCATG
CTACAGGAAG CTGTGGACGC GCTGTTCGAT AACGGCCGTC GTGGTCGCGT CATCACCGGT
GCTAACAAGC GTCCGTTGAA GTCGCTGTCC GATATGCTCA AGGGCAAGCA GGGTCGCTTC
CGTCAGAACC TGCTCGGCAA GCGCGTCGAC TATTCCGGTC GTTCGGTCAT CGTGACCGGT
CCGGAACTCA AACTGCACCA GTGCGGCCTG CCGAAGAAGA TGGCGCTCGA ACTGTTCAAG
CCATTCATCT ACGCGCGTCT TGACGCCAAG GGTTACTCCT CGACCGTTAA GCAGGCGAAG
AAGCTGGTTG AAAAGGAACG TCCGGAAGTC TGGGATATCC TCGACGAAGT GATCCGTGAG
CATCCGGTTC TTCTGAACCG CGCGCCTACG CTGCACCGTC TTGGTATCCA GGCCTTCGAA
CCCACCCTGA TCGAAGGCAA GGCTATCCAG TTGCATCCGC TCGTTTGTAC GGCGTTCAAC
GCCGACTTCG ACGGTGACCA GATGGCTGTT CACGTTCCGC TGTCGCTCGA AGCCCAGCTT
GAAGCACGCG TGCTGATGAT GTCGACCAAC AACATCCTGC ACCCTGCCAA CGGCGCACCG
ATCATCGTTC CTTCGCAGGA CATGGTTCTC GGCCTCTATT ATCTGTCCAT CGTGGCAGAC
AAGGAGCCGG GCGAGGGCAT GATGTTCGCC GATATGGGCG AGCTGCAGCA TGCGCTTGAA
AACAAGGTCG TCACGCTGCA CACCAAGATC AAGGGCCGTT TCAAGACGGT CGATGCCGAA
GGCAAGCCTG TGTCGAAGAT CTACGACACG ACGCCTGGCC GCATGATCAC CGGTGAGCTG
CTGCCGAAGA ACGTCAACGT GCCTTTCGAC ATCTGCAATC AGGAGATGAC AAAGAAGAAC
ATCTCCAAGA TGATCGATCA CGTCTACCGC CATTGCGGTC AGAAAGAGAC GGTTATCTTC
TGCGATCGCA TCATGCAGCT CGGCTTCGCG CATGCCTGCC GTGCAGGCAT TTCCTTCGGC
AAGGATGACA TGGTCATTCC GGATACGAAG GCGAAGATCG TTGCCGACAC CGAAGCGCTT
ACGACCGAAT ACGAACAGCA GTACAATGAC GGCCTGATCA CTCAGGGCGA AAAGTACAAC
AAGGTCGTCG ACGCCTGGGG CAAGGCAACC GACAAGATCA CCGAAGAGAT GATGGCGCGC
CTGAAGGCCG TCGAATTCGA TCCGGTGACC GGTCGCCAGA AGCAGATGAA CTCGGTCTAC
ATGATGTCGC ATTCGGGTGC CCGTGGTTCG GTCAACCAGA TGCGTCAGCT TGGCGGTATG
CGCGGCCTGA TGGCCAAGCC GTCGGGTGAA ATCATCGAAA CCCCGATCAT CTCGAACTTC
AAGGAAGGCC TGACCGTTAA CGAGTACTTC AACTCGACCC ACGGTGCCCG TAAGGGTCTG
GCAGACACCG CCTTGAAGAC TGCTAACTCG GGCTACCTGA CCCGTCGTCT CGTTGACGTT
GCACAGGATG CGATCATTTC GGAAGTCGAT TGCGGCGCCG AAATCGGTCT CACCATGCAG
CCGATCGTCG ATGCCGGCCA GATCGTGGCT TCGATTGGCC AGCGCGTTCT GGGCCGTACG
GCTCTCGATC CGATCCTGCA TCCGACCACC GGCGAAGTCA TCGTCGAGGC TGGCCGCATG
ATCGAGGAAA AGGACGTCGA GATCATCGAG AAGGCTGCCA TCCAGTCGAT CCGCATCCGC
TCGGCCCTGA CCTGCGAAAC CCGCAACGGC GTTTGCGCCA AGTGCTATGG TCGCGACCTT
GCACGCGGTA CTCCGGTCAA CCAGGGTGAA GCTGTCGGCG TTATCGCCGC TCAGTCGATC
GGCGAGCCGG GCACTCAGCT CACCATGCGT ACCTTCCACC TTGGCGGTAC TGCACAGGTT
GTTGACAGCT CGTATCTCGA AGCTTCGTAC GAAGGCACCG TCAAGCTGCG TAACCGCAAT
GTGGTTCGCA ACTCCGATGG CAACCTCGTG GTGATGGGCC GTAACATGGC TGTGCTGATC
CTCGACAATA CGGGCAAGGA ACGTGCGGTC CATCGCGTGA CCTACGGTTC GCGTCTGTTT
GTTGATGAGG CCGACACGGT CAAGCGCGGC CAGCGTATTG CCGAGTGGGA TCCGTACACC
CGTCCGATCA TGACCGAAGT TGAAGGCTAC GTTGAGTTCG AAGATCTCGT CGATGGTCTC
TCGGTTTCGG AATCGGCTGA CGAGTCGACC GGTATCACCA AGCGCGTCGT TATCGACTGG
CGTTCAACCC CTCGCGGTTC GGACCTCAAG CCTGCCATGG TCATCAAGGA CAAGGCTGGC
AAGATCCTGA AACTGTCGAA GGGTGGCGAT GCCCGCTTCA TGCTCTCCGT GGAATCGATC
CTTTCGGTCG AGCCGGGCGC GCATGTTAAG GCTGGTGACG TTATCGCCCG TCTGCCGATG
GAAAGCGCCA AGACCAAGGA CATCACCGGT GGTCTGCCGC GCGTTGCGGA ACTGTTCGAA
GCACGTCGTC CGAAGGACCA TGCCGTCATC GCCGAGATCG ATGGTACCGT TCGTTTCGGT
CGCGACTACA AGAACAAGCG TCGCATCATC ATCGAGCCGA ACGACGACAC GATCGAGCCG
GTCGAGTATC TCATTCCGAA GGGCAAGCCG TTCCATCTTC AGGACGGTGA CGTCATCGAA
AAGGGTGAGT ACATCCTCGA CGGTAACCCG GCACCGCATG ACATTCTGGC GATCAAGGGC
GTCGAAGCTC TGGCTTCGTA CCTCGTGAAC GAAATCCAGG AAGTCTATCG TTTGCAGGGC
GTTTTGATCA ACGACAAGCA CATCGAAGTG ATTGTTCGTC AGATGCTGCA GAAGGTGGAA
ATCACGGAAT CCGGCGATAC CGGTTACATT CCGGGCGACC ACGTCGACCG TATCGAGCTG
GAAGAGATCA ACGAACGTCT TATCGAAGAA GGCAAGAAGC CGGGTTCCGG TAATCCTGTC
CTCCTCGGTA TCACCAAGGC TTCGCTGCAG ACGCCTTCGT TCATCTCGGC TGCGTCGTTC
CAGGAGACGA CCCGCGTGCT TACCGAAGCT GCGGTTGCCG GCAAGATGGA CACGCTGCAG
GGTCTCAAGG AAAACGTCAT CGTCGGCCGT CTTATCCCGG CCGGTACTGG CGGCATGACC
AACCAGATCC GTCGCATCGC AACTGCACGC GACGAGCTGA TTATCGATGA GCGCCGCAAG
TCTTCGGGTT CTACCGAAGC CAATGCAATG CTGGTCGATA TGACCAACAA CGCTGCCGAG
TAA
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| Protein sequence | MNQEVMNLFN PQAPAQTFDS IRISIASPEK ILSWSYGEIK KPETINYRTF KPERDGLFCA
RIFGPIKDYE CLCGKYKRMK YKGIICEKCG VEVTLSRVRR ERMGHIELAA PVAHIWFLKS
LPSRIGTLLD MTLKDIERVL YFENYIVTEP GLTSLKEHQL LSEEEYMIAV DEFGEDQFTA
LIGAEAIYEL LASMELEKIA ADLRVDLAET TSDLKQKKLM KRLKIVENFL ESGNRPEWMI
MKIVPVIPPD LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLIELRAP GIIIRNEKRM
LQEAVDALFD NGRRGRVITG ANKRPLKSLS DMLKGKQGRF RQNLLGKRVD YSGRSVIVTG
PELKLHQCGL PKKMALELFK PFIYARLDAK GYSSTVKQAK KLVEKERPEV WDILDEVIRE
HPVLLNRAPT LHRLGIQAFE PTLIEGKAIQ LHPLVCTAFN ADFDGDQMAV HVPLSLEAQL
EARVLMMSTN NILHPANGAP IIVPSQDMVL GLYYLSIVAD KEPGEGMMFA DMGELQHALE
NKVVTLHTKI KGRFKTVDAE GKPVSKIYDT TPGRMITGEL LPKNVNVPFD ICNQEMTKKN
ISKMIDHVYR HCGQKETVIF CDRIMQLGFA HACRAGISFG KDDMVIPDTK AKIVADTEAL
TTEYEQQYND GLITQGEKYN KVVDAWGKAT DKITEEMMAR LKAVEFDPVT GRQKQMNSVY
MMSHSGARGS VNQMRQLGGM RGLMAKPSGE IIETPIISNF KEGLTVNEYF NSTHGARKGL
ADTALKTANS GYLTRRLVDV AQDAIISEVD CGAEIGLTMQ PIVDAGQIVA SIGQRVLGRT
ALDPILHPTT GEVIVEAGRM IEEKDVEIIE KAAIQSIRIR SALTCETRNG VCAKCYGRDL
ARGTPVNQGE AVGVIAAQSI GEPGTQLTMR TFHLGGTAQV VDSSYLEASY EGTVKLRNRN
VVRNSDGNLV VMGRNMAVLI LDNTGKERAV HRVTYGSRLF VDEADTVKRG QRIAEWDPYT
RPIMTEVEGY VEFEDLVDGL SVSESADEST GITKRVVIDW RSTPRGSDLK PAMVIKDKAG
KILKLSKGGD ARFMLSVESI LSVEPGAHVK AGDVIARLPM ESAKTKDITG GLPRVAELFE
ARRPKDHAVI AEIDGTVRFG RDYKNKRRII IEPNDDTIEP VEYLIPKGKP FHLQDGDVIE
KGEYILDGNP APHDILAIKG VEALASYLVN EIQEVYRLQG VLINDKHIEV IVRQMLQKVE
ITESGDTGYI PGDHVDRIEL EEINERLIEE GKKPGSGNPV LLGITKASLQ TPSFISAASF
QETTRVLTEA AVAGKMDTLQ GLKENVIVGR LIPAGTGGMT NQIRRIATAR DELIIDERRK
SSGSTEANAM LVDMTNNAAE
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