| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1947 |
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| Symbol | rpoB |
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| ID | 5380078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 2046339 |
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| End bp | 2050472 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640834615 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001370492 |
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| Protein GI | 153009277 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGA CCCATTCATT CAATGGTCGC AAGCGCGTAC GCAAATTTTT CGGCAAGATC
CCAGAGGTCG CCGAGATGCC GAACCTTATC GAGGTTCAAA AGGCATCTTA CGACCAGTTC
CTTATGGTTG AAGAACCATC CGGTGGGCGT TCTGACGAGG GTTTGCAGGC GGTTTTCAAG
TCTGTTTTCC CAATTCAGGA TTTCTCCGGC GCTTCAATGC TCGAATTCGT TCGCTACGAA
TTCGACGCAC CAAAATTCGA CGTTGACGAA TGCCGTCAGC GCGATCTGAC GTATTCGGCG
CCACTCAAGG TGACGCTGCG TCTTATCGTG TTCGATATTG ACGAAGATAC CGGCGCGAAG
TCGATCAAGG ACATCAAGGA GCAGGATGTC TACATGGGCG ATATGCCGCT CATGACCGAC
AACGGCACCT TCATCGTCAA TGGCACCGAG CGCGTGATCG TTTCGCAGAT GCACCGTTCG
CCGGGCGTCT TCTTCGACCA CGACAAGGGC AAGACCCATT CTTCGGGCAA GCTCCTGTTC
GCCGCGCGCG TCATTCCTTA CCGCGGTTCC TGGCTCGATA TCGAGTTCGA TTCCAAGGAC
ATCGTCTACG CACGTATCGA CCGCCGCCGC AAGCTGCCGG CCACCACGCT GCTGATGGCT
CTCGGCATGG ACGGCGAAGA CATTCTGTCG ACGTTCTACA AGACTGTCAC CTATACGCGT
GACGGCGACA ACTGGCGCAT CCCGTATTCG GCTGACCGCT TCAAGGGCAT GAAGATCATC
TCCGATCTCA TCGATGCGGA CACCGGTGAA GTCGTTCTTG AAGCTGGCAA GAAGCTGACC
GCCCGTTCGG CCAAGCAGCT TGCTGAAAAG GGCCTCAAGG CCATCAAGGC GACGGAAGAC
GATCTGTTCG GTTCGTATCT TGCGGAAGAT GTCGTCAATT ACGCAACCGG CGAGATTTAT
CTCGAAGCTG GTGACGAAAT CGACGAGAAG GTCCTCAAGA CTCTGATCGA CACCGGCGAG
ACGGAAATCA ACGTCCTCGA CATCGATCAT ATCAACATCG GTGGCTACAT CCGCAACACG
CTGGCTGTCG ACAAGAACGA AAGCCGTCAG GAAGCCCTGT TCGACATCTA TCGCGTCATG
CGTCCGGGCG AACCGCCTAC GATGGATTCC GCCGAAGCGA TGTTCAACTC GCTGTTCTTC
GACGCTGAGC GTTACGACCT TTCGGCCGTT GGTCGCGTCA AGATGAACAT GCGTCTGGAT
CTCGACGCGG AAGATACCGT GCGCGTTCTG CGCAAGGAAG ACATCCTGGC CGTGGTCAAG
ATGCTGGTGG AACTGCGCGA CGGTCGCGGC GAAATCGACG ACATCGACAA TCTCGGCAAC
CGCCGTGTGC GTTCGGTCGG CGAACTGATG GAAAATCAGT ATCGCGTCGG TCTGCTCCGT
ATGGAGCGCG CGATCAAGGA ACGTATGTCC TCGATCGAAA TCGACACGGT CATGCCGCAG
GATTTGATCA ACGCGAAGCC GGCTGCTGCA GCCGTGCGCG AGTTCTTCGG TTCCTCGCAG
CTGTCGCAGT TCATGGATCA GACCAACCCG CTTTCGGAAA TCACCCACAA GCGCCGTCTC
TCGGCTCTTG GACCGGGCGG TCTGACCCGC GAGCGCGCTG GCTTCGAAGT CCGCGACGTG
CATCCGACCC ACTATGGCCG TATCTGCCCG ATTGAAACGC CGGAAGGCCC GAATATCGGT
CTGATCAACT CGCTTGCAAC TTTTGCCCGC GTCAACAAGT ACGGCTTCAT CGAAAGCCCG
TACCGCAAGG TTGTCGACGG CAAGGTAACG AACGACGTTG TCTATCTGTC GGCGATGGAA
GAAGCCAAGC ACTCGGTTGC GCAGGCTAAC GTCGAGCTGG ACGAGCGGGG CGGTTTCGTT
GACGAATTCG TCATCTGCCG TCATGCAGGC GAAGTGATGA TGGCTCCGCG TGAAAACGTG
GATCTGATGG ACGTGTCGCC GAAGCAGCTC GTTTCGGTTG CTGCGGCTCT CATCCCGTTC
CTTGAAAACG ACGACGCCAA CCGCGCTCTC ATGGGCTCGA ACATGCAGCG TCAGGCTGTG
CCGCTCGTTC GCGCAGAAGC GCCGTTCGTC GGTACGGGCA TGGAAGCTGT CGTTGCGCGT
GACTCCGGTG CCGCTATTGC AGCACGCCGT GGCGGTGTGG TCGATCAGGT TGATGCAACG
CGTATCGTTA TCCGTGCGAC TGAAGATCTC GATCCGTCCA AGTCGGGCGT CGATATCTAT
CGCCTGATGA AGTTCCAGCG TTCGAACCAG AACACCTGCA TCAATCAGCG TCCGCTCGTA
CGCGTTGGCG ATCCCATCCA GAAGGGTGAC ATCATCGCTG ACGGTCCGTC GACGGATCTG
GGCGATCTGG CTCTCGGCCG TAACGTGCTC GTCGCGTTCA TGCCGTGGAA CGGCTACAAC
TACGAAGATT CGATCCTTCT TTCCGAGAAG ATCGTTTCGG ACGACGTGTT CACTTCGATC
CATATCGAGG AATTCGAAGT AGCTGCCCGC GACACCAAGC TTGGACCTGA GGAAATCACT
CGCGATATTC CGAACGTTTC GGAAGAAGCG CTGAAGAATC TCGACGAAGC CGGTATCGTG
TACATCGGTG CCGAAGTGCA TCCTGGCGAC ATTCTTGTCG GCAAGATCAC GCCGAAGGGT
GAAAGCCCGA TGACGCCGGA AGAGAAGCTC CTGCGCGCCA TCTTCGGTGA AAAGGCATCG
GACGTCCGTG ACACCTCCAT GCGTATGCCG CCCGGAACCT ACGGTACGGT TGTGGAAGTT
CGCGTTTTCA ATCGCCACGG CGTTGAAAAG GACGAACGCG CCATGGCTAT CGAGCGCGAG
GAAATCGAGC GTCTCGCCAA GGACCGTGAC GACGAACAGG CTATCCTGGA TCGCAACGTC
TATGGCCGTC TTGCCGACAT GATCGATGGC AAGGTCGCTG CAGCGGGTCC GAAGGGCTTC
AAGAAGGGCT CGACGATCAC CCGTGAACTG ATGACCGAAT ATCCGCGGTC GCAGTGGTGG
CAGTTTGCTG TCGACGACGA GAAGCTCCAG GGCGAACTTG AAGCTCTGCG TGGCCAGTAT
GACGAATCCA AGAAGCTGCT CGAAGCACGC TTCATGGACA AGGTCGAGAA GGTACAGCGC
GGCGACGAGA TGCCTCCAGG CGTCATGAAG ATGGTCAAGG TCTTTGTCGC TGTGAAGCGC
AAGATCCAGC CAGGCGACAA GATGGCTGGC CGTCACGGCA ACAAGGGTGT GGTTTCCCGC
ATTCTGCCAG TCGAGGACAT GCCGTTCCTC GAAGACGGTA CGCATGCCGA CATCGTGTTG
AACCCGCTTG GCGTTCCGAG CCGTATGAAT GTGGGCCAGA TTCTGGAAAC CCACCTCGGC
TGGGCATGCG CTGGCATGGG CAAGAAGATC GGTGAGCTCA TCGACGTTTA TCGCAAGACG
GCCAATATCG AGCCGCTGCG CGATACGCTG GAGCACATCT ATCCGGACAA CGACCGCAAC
GAACCGGTCC GGTCTTATGA CGACGATTCC GTCCTCATGC TGGCCAACCA GGTGAAGCGC
GGCGTGTCGA TCGCAACGCC GGTCTTCGAC GGTGCGGTGG AAGCCGACAT CAACGCGATG
CTGACGGATG CGGGTCTTGC AACGTCTGGT CAGTCGACGC TTTACGATGG CCGTACGGGT
GAGCCGTTCG ACCGTCAGGT GACCATGGGC TACATCTATA TGTTGAAGCT CCACCACCTG
GTCGACGACA AGATCCACGC ACGTTCGATC GGACCTTACT CGCTCGTTAC GCAGCAGCCT
CTGGGTGGTA AGGCTCAGTT CGGTGGCCAG CGCTTCGGCG AAATGGAGGT CTGGGCTCTG
GAAGCATACG GTGCGGCTTA TACGCTGCAG GAAATGCTGA CCGTCAAGTC GGACGACGTG
GCAGGCCGTA CCAAGGTCTA CGAAGCGATC GTGCGCGGCG ACGACACGTT CGAAGCAGGC
ATTCCGGAGA GCTTCAACGT TCTCGTAAAG GAAATGCGTT CGCTCGGTCT CAATGTCGAG
CTGGACGATA CACGCGACGA ACAGCAGCAG GCCCTGCCTG ACGCAGCGGA ATAA
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| Protein sequence | MAQTHSFNGR KRVRKFFGKI PEVAEMPNLI EVQKASYDQF LMVEEPSGGR SDEGLQAVFK
SVFPIQDFSG ASMLEFVRYE FDAPKFDVDE CRQRDLTYSA PLKVTLRLIV FDIDEDTGAK
SIKDIKEQDV YMGDMPLMTD NGTFIVNGTE RVIVSQMHRS PGVFFDHDKG KTHSSGKLLF
AARVIPYRGS WLDIEFDSKD IVYARIDRRR KLPATTLLMA LGMDGEDILS TFYKTVTYTR
DGDNWRIPYS ADRFKGMKII SDLIDADTGE VVLEAGKKLT ARSAKQLAEK GLKAIKATED
DLFGSYLAED VVNYATGEIY LEAGDEIDEK VLKTLIDTGE TEINVLDIDH INIGGYIRNT
LAVDKNESRQ EALFDIYRVM RPGEPPTMDS AEAMFNSLFF DAERYDLSAV GRVKMNMRLD
LDAEDTVRVL RKEDILAVVK MLVELRDGRG EIDDIDNLGN RRVRSVGELM ENQYRVGLLR
MERAIKERMS SIEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP LSEITHKRRL
SALGPGGLTR ERAGFEVRDV HPTHYGRICP IETPEGPNIG LINSLATFAR VNKYGFIESP
YRKVVDGKVT NDVVYLSAME EAKHSVAQAN VELDERGGFV DEFVICRHAG EVMMAPRENV
DLMDVSPKQL VSVAAALIPF LENDDANRAL MGSNMQRQAV PLVRAEAPFV GTGMEAVVAR
DSGAAIAARR GGVVDQVDAT RIVIRATEDL DPSKSGVDIY RLMKFQRSNQ NTCINQRPLV
RVGDPIQKGD IIADGPSTDL GDLALGRNVL VAFMPWNGYN YEDSILLSEK IVSDDVFTSI
HIEEFEVAAR DTKLGPEEIT RDIPNVSEEA LKNLDEAGIV YIGAEVHPGD ILVGKITPKG
ESPMTPEEKL LRAIFGEKAS DVRDTSMRMP PGTYGTVVEV RVFNRHGVEK DERAMAIERE
EIERLAKDRD DEQAILDRNV YGRLADMIDG KVAAAGPKGF KKGSTITREL MTEYPRSQWW
QFAVDDEKLQ GELEALRGQY DESKKLLEAR FMDKVEKVQR GDEMPPGVMK MVKVFVAVKR
KIQPGDKMAG RHGNKGVVSR ILPVEDMPFL EDGTHADIVL NPLGVPSRMN VGQILETHLG
WACAGMGKKI GELIDVYRKT ANIEPLRDTL EHIYPDNDRN EPVRSYDDDS VLMLANQVKR
GVSIATPVFD GAVEADINAM LTDAGLATSG QSTLYDGRTG EPFDRQVTMG YIYMLKLHHL
VDDKIHARSI GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ EMLTVKSDDV
AGRTKVYEAI VRGDDTFEAG IPESFNVLVK EMRSLGLNVE LDDTRDEQQQ ALPDAAE
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