Gene Oant_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1937 
Symbol 
ID5379895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand+ 
Start bp2037903 
End bp2038583 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID640834602 
Productrhomboid family protein 
Protein accessionYP_001370482 
Protein GI153009267 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAATA TTCCGGGCGT TGTTCTCGCT CTGATTGGCC TCTGCGCCGC AGTCTATATT 
TATCAGAACT ACCTCATCAG CGAGCAGCAG AACTATGAAT TCATGCTGAA CTTCGCGCTC 
ATTCCGGCGC GGTTCTCGCT GGCGGACGGG TTCACCGATC CCGCCGCACT TTTTACGCTC 
ATCAGCTATT CCTTCATGCA TGGCGGCTTC GCCCATATTG CCGTCAACAT GATCTGGCTT 
GCGGCTTTCG GTTCCCCGCT GGCCGGGCGC ATCGGTACCG GACGAATGAT CGTTTTCTGG 
ATATTCACTT CGGTGATTGC CGGGTTGACC CATTACGCGA TCTATCCGGA CAGCGTTTCG 
CCACTGGTGG GCGCATCGGG CGCGATTTCG GGAATGATGG GTGCAGCGGC GCGTTACGGT 
TTTCGTCGCA TCGGCCATGG ACGCAGATCG GAATTCGCAG GCCCCGTTCT TCCGGTAGGG 
CTGACCCTGA CGCTGAAGCC CGTCCTGACT TTTGTGGGTG TCTGGTTCCT GATCAACATC 
ATTACCGGTC TTTACTCGAC TGGCGGGGCG GACCTTTCCA GCATTGCCTG GGAAGCGCAT 
ATAGGCGGCT TCATCGCCGG CTTTTTCGGT ATTTCACTGA TGGACCGCCC ACGCAGCTAT 
GATGCCGTGC TGAGGCGATA G
 
Protein sequence
MFNIPGVVLA LIGLCAAVYI YQNYLISEQQ NYEFMLNFAL IPARFSLADG FTDPAALFTL 
ISYSFMHGGF AHIAVNMIWL AAFGSPLAGR IGTGRMIVFW IFTSVIAGLT HYAIYPDSVS 
PLVGASGAIS GMMGAAARYG FRRIGHGRRS EFAGPVLPVG LTLTLKPVLT FVGVWFLINI 
ITGLYSTGGA DLSSIAWEAH IGGFIAGFFG ISLMDRPRSY DAVLRR