| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1844 |
|---|
| Symbol | |
|---|
| ID | 5379560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1940218 |
|---|
| End bp | 1941498 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640834506 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001370389 |
|---|
| Protein GI | 153009174 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC CCGTCAAGCT GACAAAATCG TACATCGACA ATCTACGGCC CACCGACAAG
GACGCGATCT ATTGGGATAG CGAACTGAAA GGGTTTGGCG TCAAGGTGAC ACCTAAAAAC
AGGAAGGTGT TTCTCGTGAT GCACCGTCCG AAAGGTCATA CCGGCGCTGC GAAGAAATAT
ACCATCGGCA CATATGGCGA ATGGACCGTG CAGCAAGCGC GTGATCGTGC GCGTGAGGTT
TTGACGGAAG GCAGCAAGGG CAATGATGTC GGCGCTATCG AACGTGTTGA ACGACAGCGC
AAATCATCCG ACATTCTGAC TGATCTGGTT GACGAGTTTC TGAAAAAACA CGCTGCGCAG
AACAAAACGC ATGATGAGAC AAAACGCATT CTAGAACGCG AGCTTTTATC GAAGCACGGC
AAGAAATCCA TACATGTCGT CACCAAGCAC GATATTCTAT CTGTGCTTGA AGGCATACGG
GATCGCGGCG CACCCTACAT GGCCAACCGT GTATTGGCTG CTATCCGCAA ATTCATGAAC
TGGTGCGTGT CACGCGACAT TATTGCAATC TCACCGGCCA ACGGCATTTC ATTACCTACA
AGAGAGGTGT CGCGTGATCG CGTTCTTACG GCAGATGAAA CGCGGGCCGC TTTGATGGCA
GCTAAAAGCG TCGGTTATCC GTACGGAAAT ATTGTCGAAT TGCTATTTCT GACAGCGCAA
CGACGCGATG AGGTTGGCGA CATGCGATGG AGCGAACTCA ATCTCGATAA AGCTACGTGG
ACGATACCAG CCGAACGCGT CAAGAATGGA AAGGCGCACG ACGTGCACCT GTCAAAAGAT
GCATTGGCGC TGCTGCATTC AATTCCGCGC TTTGTGTCCG CCGACAACGT TGAAAGCGAT
CTGGTATTCA CAACGACAGG CAACACGCCA TTCAGCGGCT ATTCAAAATC AAAAACGACG
CTTGATAAAA AGATGCTGGA AGTGTTGCAA AAGATGGCGG AGGACAAAGG TGTTAATCCC
GAATTGGTCA AATTAACACC TTGGCGGTTA CACGACATAC GCCGCACAGT TACGACCGAG
CTTTCCAAAC TTGGCGTTGC GATCCATGTT GCCGATGCTA TCCTCAATCA TAAGAGCGGC
GTAATCAGCG GCGTTGCTGC CGTATATCAA AAGAATGCGT TCATTCAGGA AAGGCAAGAT
GCGCTGAATA AGTGGTGCGA TCACCTCAAC AAAATATGCG CAACGACGCC CAATGGCGTG
GACACCAATG AAAATTCATG A
|
|---|
| Protein sequence | MSQPVKLTKS YIDNLRPTDK DAIYWDSELK GFGVKVTPKN RKVFLVMHRP KGHTGAAKKY
TIGTYGEWTV QQARDRAREV LTEGSKGNDV GAIERVERQR KSSDILTDLV DEFLKKHAAQ
NKTHDETKRI LERELLSKHG KKSIHVVTKH DILSVLEGIR DRGAPYMANR VLAAIRKFMN
WCVSRDIIAI SPANGISLPT REVSRDRVLT ADETRAALMA AKSVGYPYGN IVELLFLTAQ
RRDEVGDMRW SELNLDKATW TIPAERVKNG KAHDVHLSKD ALALLHSIPR FVSADNVESD
LVFTTTGNTP FSGYSKSKTT LDKKMLEVLQ KMAEDKGVNP ELVKLTPWRL HDIRRTVTTE
LSKLGVAIHV ADAILNHKSG VISGVAAVYQ KNAFIQERQD ALNKWCDHLN KICATTPNGV
DTNENS
|
|---|
| |