| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1754 |
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| Symbol | ligA |
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| ID | 5378909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 1845210 |
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| End bp | 1847375 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640834415 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_001370299 |
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| Protein GI | 153009084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA CTCCCGTCGA AAAACTGACC GAACCTGAAG CCGTTTCAGA ACTGGAACGT
CTGGCGCGCG AAATTGCGCA TCATGATGAG CTCTATCACG CCAATGACCG GCCAGAGATT
TCCGATGCCG AGTATGACGC GCTAAAGCGG CGTAACGATG CGATTGAAGC GCGCTTCCCG
CATCTGGTGC GGACAGACAG CCCGTCCTTG CGTGTTGGTA CAGCACCTGT TTCCAAATTT
GCGCAGGTTG TTCATGCACG CCCGATGCTT TCGCTCGGCA ATGCGTTTTC AGACGATGAC
GTCCGCGATT TCGTGGGCAG TGTCTATCGC TTCCTGGGGC CGCTGCCGGA TAATTCCATT
GCATTTACCG CTGAACCGAA GATCGATGGG CTTTCCATGT CGATCCGTTA CGAGAATGGA
ATTCTGATTA GCGGCGCGAC GCGCGGTGAC GGCACAACCG GCGAGAATGT CACGACGAAT
ATCCGCACCA TTGCCGAAAT TCCGAACCGG CTTCCGGCTG GAGCGCCTTC CGTCGTTGAA
GTACGCGGTG AGGTCTATAT GGCCAAAAGT GACTTCCTCG CGCTCAACGA ACAGATGGCC
GCTGAAGGCA AGCAGACTTA TGTGAACCCG CGCAACACGG CAGCAGGTTC CCTGCGCCAG
CTCGATGCCA AGGTGACGGC GAGCCGCAAA CTGAAATTCT TTGCCTATGC CTGGGGCGAA
ATGTCGGACA TGCCTGCCGA TACGCAGATG GGCATGGTCG AGATTTTCCG CGAATGGGGT
TTCCCGGTCA ATCCGCTGAC GAAGCGGCTT CACGGTGCAG ACGAATTGCT CGCGCATTAC
CGCGCCATCG GTCTTGAGCG CGCTCAGCTC GACTACGACA TTGACGGTGT CGTCTATAAG
GTTGATCGGC TCGATCTGCA GACGCGGCTC GGTTTCCGCT CGCGCAGCCC ACGATGGGCC
ATTGCGCACA AGTTTCCGGC AGAACAGGCT ACGACGATCT TGCGCGGCAT CGACATTCAG
GTCGGGCGCA CCGGCGCGCT GACGCCAGTG GCGCGGCTGG AGCCAATCAC CGTCGGTGGT
GTGGTCGTCA CCAATGCGAC GCTGCACAAC GAGGACTATA TCAAGGGTAT CGGACTCAAG
GGTGAGCGTA TTCGTGCTGA TGAGCATGAT ATTCGCGTCG GCGATACGGT CATCGTGCAG
CGCGCAGGCG ATGTGATCCC ACAGATTGTC GATGTCGTGT TGGAGAAGCG CAAAGCCGAT
GCAACGCCGT TTGTGTTCCC GCATGAATGC CCGGTCTGTC ACAGTCATGC CGTGCGCGAA
GAGGGCGAGG CGGTCTATCG CTGCACCGGC GGCCTGACCT GTGCTGCGCA GGCGGTCGAG
CGCATTCGTC ATTTCGTATC GCGCAATGCG TTCGATATTG AAGGCCTTGG CGAAAAGCAG
GTCGAATTCT TCTTCCATGC CGAAGATGAC AAACTGAAGA TCAAATCGCC TGCGGATATC
TTCACGCTGC AACAGCGACA GGCTGAATCG CCTCTCAAGA AACTGGAGAA CATTGAAGGT
TTCGGCGCGA CTTCCGTGAA GAAGCTTTAT GATGCGATCA ATGATCGGCG CGAGATTGCC
CTGCATCGCT TTCTGTTCGG CCTTGGTATC CGTCATGTTG GTGAGGTGAA TGCCAAGCGC
TTTGCGCGCG CCTATCTGTC TTATGCTGCC TTTGAAGAAG CTGCTCTGGA AGCAGTTCCG
CCAAAAGAGG GTGACCGCAC CGACAAGGGC AATGAAGCCT GGCAGGAACT GATTGCCGTT
GAGGGCATCG GTTCCATCGT TGCTGAAGCT GTCGTGGATT TTTATGCGGA GCCGCATAAT
CGCGAAGTAT TGGACAACTT GTTCAAAGCA GGAGTGACTC CTGTAGACGA AGTTGCACTC
GTATCGACCG GTTCGCCGGT CGAAGGCAAG ACGGTGGTAT TTACCGGCAG TCTGGAACGT
ATGTCGCGCG ATGAGGCAAA GGCCATGGCT GAGCGCTACG GAGCAAAGAC GGCTGGATCG
GTTTCGAAAA AGACCGATCT TGTGGTGGCC GGACCGGGGG CGGGTTCCAA ACTCGCCAAG
GCATCCGAGT TGGGAATCGA AGTCATTGAT GAAGACGCCT GGTTTACACT GGTCGGAGAA
GAATAA
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| Protein sequence | MTDTPVEKLT EPEAVSELER LAREIAHHDE LYHANDRPEI SDAEYDALKR RNDAIEARFP
HLVRTDSPSL RVGTAPVSKF AQVVHARPML SLGNAFSDDD VRDFVGSVYR FLGPLPDNSI
AFTAEPKIDG LSMSIRYENG ILISGATRGD GTTGENVTTN IRTIAEIPNR LPAGAPSVVE
VRGEVYMAKS DFLALNEQMA AEGKQTYVNP RNTAAGSLRQ LDAKVTASRK LKFFAYAWGE
MSDMPADTQM GMVEIFREWG FPVNPLTKRL HGADELLAHY RAIGLERAQL DYDIDGVVYK
VDRLDLQTRL GFRSRSPRWA IAHKFPAEQA TTILRGIDIQ VGRTGALTPV ARLEPITVGG
VVVTNATLHN EDYIKGIGLK GERIRADEHD IRVGDTVIVQ RAGDVIPQIV DVVLEKRKAD
ATPFVFPHEC PVCHSHAVRE EGEAVYRCTG GLTCAAQAVE RIRHFVSRNA FDIEGLGEKQ
VEFFFHAEDD KLKIKSPADI FTLQQRQAES PLKKLENIEG FGATSVKKLY DAINDRREIA
LHRFLFGLGI RHVGEVNAKR FARAYLSYAA FEEAALEAVP PKEGDRTDKG NEAWQELIAV
EGIGSIVAEA VVDFYAEPHN REVLDNLFKA GVTPVDEVAL VSTGSPVEGK TVVFTGSLER
MSRDEAKAMA ERYGAKTAGS VSKKTDLVVA GPGAGSKLAK ASELGIEVID EDAWFTLVGE
E
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