| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1733 |
|---|
| Symbol | |
|---|
| ID | 5380250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1818096 |
|---|
| End bp | 1818755 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640834393 |
|---|
| Product | lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001370278 |
|---|
| Protein GI | 153009063 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.254136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA AATTTGTTGT TGTTTGCGCC CTTGTTGGCG CGATGAGTTC GTTTGGCCTG
AATCCAGCAC TGAGTGCCCC TTCAACTGAA CCGACCAACC TCGCAGCTCT CCTCAAGGCA
CGCCAGCAGA ACAAGACTGC CGAGGCGGAA AAGCCAACCA AAGCGCCGAA GAAGGCATCG
GTCGTCAGCC GCCGTGCGGC TCCGACTGCC AAGAATTCTA CGGGCAAGGG TTCTGCTGCT
AAGCGTTCGC AGTCGAAGGA CACGACTGCC CGTAACGCCA AGAGCGGCGG CGCTTATTCA
AGCATCATCA ATCGTTACGC ATCGACCTAT GGCGTGCCTT CCGCACTTGC CCATGCGGTT
GTGCGTCACG AAAGCAATTT CCAGCCGAAT GTGCGTGGCA AGGCCGGTGA AATCGGCCTG
ATGCAGATCA AGCTCTCGAC CGCACGTGGC CTCGGCTACA CGGGTTCAGC CAAGGGTCTC
TATGAGCCTT CCACGAACAT CCAGTTCGGC ATGAAGTATC TGGCCCAGGC GCAGAAGCTC
GGCGGCGGCA GCACTTGCGG CACGATCCTG AAGTACAATG CCGGTCACGG CGCAAAGCGT
ATGAACCCGA CCTCGGCGAA ATATTGCAGC TCGGTCAAGG CCTATATGCG CGCGCTCTGA
|
|---|
| Protein sequence | MKIKFVVVCA LVGAMSSFGL NPALSAPSTE PTNLAALLKA RQQNKTAEAE KPTKAPKKAS
VVSRRAAPTA KNSTGKGSAA KRSQSKDTTA RNAKSGGAYS SIINRYASTY GVPSALAHAV
VRHESNFQPN VRGKAGEIGL MQIKLSTARG LGYTGSAKGL YEPSTNIQFG MKYLAQAQKL
GGGSTCGTIL KYNAGHGAKR MNPTSAKYCS SVKAYMRAL
|
|---|
| |