Gene Oant_1694 details

Gene Information

• Locus tag: Oant_1694
• ID: 5379171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 1780299
• End bp: 1780844
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640834354
• Product: RNA polymerase sigma factor
• Protein accession: YP_001370239
• Protein GI: 153009024
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAACAGA CAGATGAAAC ATCCGTTCTG ATTAGCAAAG TGGCTTTGGG TGACAAAGAC 
GCTTTCGCCT CACTTTATAA GGATACTAGC CCGAAACTAT TCGCGATTTG CCTTCGTATA 
TTGAAAGACA GATCGGAGGC AGAGGAAGCT CTTCAAGACG TCTATATCAA GATTTGGAAA 
CGTTCGAGTA CGTTTGGGAT TGGTGAAAGC GTGGCTTCAG CTTGGTTGGC AACCATCGCC 
CGCAATCATT CAATAGACGT CATTCGAGCA AGAAAACCTG TTACGGAGGA TCTTGACGAA 
ATTCATGATC TGGCTGACGA CGTCAATCCA AGCCCCGAGA AGGAGGTGTT GGCAAGAGAC 
GAAGGACGCC GGATAGATGA TTGCATGCGA GAGCTCGATC AAGTTCATGC GAAAGCGGTT 
CGGCAAGCTT ATGTGGAAGG TCTCAGCTAT CTTGAGCTCG CCCAGGAATT ACAAGTGCCT 
TTGAATACTG TACGCACTTG GTTGCGACGC AGTCTATTGA AACTGAGAGA GTGCATGCAG 
CGATGA 

 

Protein sequence

MKQTDETSVL ISKVALGDKD AFASLYKDTS PKLFAICLRI LKDRSEAEEA LQDVYIKIWK 
RSSTFGIGES VASAWLATIA RNHSIDVIRA RKPVTEDLDE IHDLADDVNP SPEKEVLARD 
EGRRIDDCMR ELDQVHAKAV RQAYVEGLSY LELAQELQVP LNTVRTWLRR SLLKLRECMQ 
R