Gene Oant_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1589 
Symbol 
ID5380205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand- 
Start bp1663254 
End bp1664222 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content58% 
IMG OID640834248 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001370134 
Protein GI153008919 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.31218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCG TATCGACCTA TATGCTTACG CTTGCCTTGG GTGGGCTTGC CACGGGAACG 
GCAATGCTGA GCGCGCCTGC AACCGGTTTC GCCGCCGAAC CTGAAAGCTG CTCGACCGTC 
CGTTTCTCGG ATGTCGGCTG GACCGACATC ACCTCGACGA CCGCGGTGGC GACAGAAATC 
CTGAAAGGTC TCGGCTACAA GACGGACATC AAGGTTCTTT CCGTGCCGGT GACCTATGCA 
TCGCTGAGCA AAAAGGACAT CGACGTCTTC CTCGGCTACT GGAACCCGTC CATGACCGCC 
GACCTCCAGC CCTATCTGGA CAACAAGACC GTCGAGACGC TGCGCACCAA TCTGACCGGC 
GCGAAATACA CGCTTGCCGT GCCAAAATAT GCTTATGACG AAGGCCTCAA GGACTTCAAG 
GATATCGCCA CGTTCAAGGA TAAGCTCGGC GGCAAGATCT ACGGCATCGA GCCGGGCAAT 
GACGGCAACC GCCTGATCCT CGACATGATC AACAAGGATG CCTTCGGCCT CAAGTCATTC 
GAGCTGGCGG AATCGTCCGA GCAGGGCATG CTGGCGCAGG TCGCGCGCAG CATCAAGAGC 
AAGGAACCGG TCGTCTTTCT GGCATGGGAG CCTCATCCCA TGAACAAGCG TTTCGAAATC 
GCGTATCTCA CCGGTGGTGA CGATTTCTTC GGCCCCAATC TCGGCGGCGC CAAGGTCGAA 
ACCAACGTTC GCACCGGCTA CACGCAGGAA TGCCCGAATG TTGGCAAGTT CCTCACCAAT 
CTGGAATTCA AGCTCGATAT CGAAAACGAC ATCATGGGCA AGATTCTCGA TGATGGCGAA 
GAGCCTTCGA AGGCTGCAAC CAACTGGCTG AAAGCCAATC CGGGCGCACT CGACCAGTGG 
CTCGCCGGTG TAACCACCGT CGACGGCAAG GAAGGCCTGC CAGCCGTCAA GGCGGCACTC 
GGTCTTTAA
 
Protein sequence
MKSVSTYMLT LALGGLATGT AMLSAPATGF AAEPESCSTV RFSDVGWTDI TSTTAVATEI 
LKGLGYKTDI KVLSVPVTYA SLSKKDIDVF LGYWNPSMTA DLQPYLDNKT VETLRTNLTG 
AKYTLAVPKY AYDEGLKDFK DIATFKDKLG GKIYGIEPGN DGNRLILDMI NKDAFGLKSF 
ELAESSEQGM LAQVARSIKS KEPVVFLAWE PHPMNKRFEI AYLTGGDDFF GPNLGGAKVE 
TNVRTGYTQE CPNVGKFLTN LEFKLDIEND IMGKILDDGE EPSKAATNWL KANPGALDQW 
LAGVTTVDGK EGLPAVKAAL GL