Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1380 |
Symbol | |
ID | 5379320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 1456308 |
End bp | 1458605 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640834039 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001369926 |
Protein GI | 153008711 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCAAA GCCGTAAACC TGAGATACCT GCAGATGTGC GGCTATCTTT TCTCAGAGCG CTGTATGGTA ATCGTACCAC GCTCTGGTTT GGCTTGCTCG CGCACGTTGT AGCCTGTGTC GTCATCTATG TGAAAACCGA TGACTGGCGC TATCTGGTTT TTGGCGGTGT ATTTGCCATC ATTGCTGTTG GTCGCATCTT CGATATGCAC AAGTTCGACC AGGCAAAACA GCAGTCGCTG TCCCATGCCG ATCTCGACCG CTGGGAAACA CGCTATCTGA TCGGTGCGTC CGCCGTCTGC CTGACGCTCG GCATGTTGTG TTTCTTCTCA AGCTATGTGC TCAGGGATTC CTTTGCCGAA CTTGCCAGCC TGACCGTGCT GCTTGCTTCG GTCGTTTCCA TTGTGGGCCG CAATTATGCA TCGGCGAAAG CCGTTGTTCT GATGTCGGCC TGCACGCTGA TCCCGGTTCT GGCCGGGCTT ATTCTGGCGG GAACGCCGTT TCACGTCATC ATTGGCCTGC TGCTGATCCC GTATTTCCTG TCCAACATCC AGATGGCAAA CGGTCTGCGC GAGTTTCTCT TCGCTGCAGT CATGGGCAAG CGACGCCTGT CCATTGTGGC CGGGCGTTTC GATGCTGCCC TCAACAACAT GCCGCAGGGC TTGCTGATGT TCGACAGCCA GCAGCGCATT GCGGTCATCA ACAATAAGGC CAAGGCGATG TTGCAGATCG CTGAACACAC CAAGCTGCAT GGCCGCAAGC TCGATGTTCT GCTGCGCTAT TGCGCGAAGA AGGGACTGTT TCCGCAAAAC GACCTGAAAA GTGTGCATGT GCGCATGCAG GATCTTCTGC TGGGCAAGCG CACGCGCGAT ATTTTCCAGC TTTCGAACCA GCGTTATATC GAATGTATCG GCAATCAGAC CCTCAATGAG GGGGCCGTCC TGATGTTCGA GGATGTGACG CAGCGCGTGG AAGCGGAAGC GCGCATTCAG CATATGGCGC GTTATGACGG CCTGACAGGC CTGCCGAACC GCAATTATTT CGAAACCCTG GTGCGATCCA TGCGTTCCCA CCAGCAAGCG GGCACGCAGG CTGCGCTCAT CGTCATCGAC ATCAATCATT TCAAGCATGT CAACGATACG TTGGGGCATC ATACCGGTGA CGTATTGCTG CGCCTGTTTG CAGAGCGGCT GAACTCGCTC GATCCGCAGC GTTTCGTCGC GTCACGCTTC GGCGGCGACG AATTCGTGGT GTTCGTCTTC AATCTGCGCA GCGAGGCCGA CGTTGCAGGC GTGATGGATC ATATCATGAC CGTCGTGACC GGCGTCTACG ATCTCGACGG CGATCAGGTG CATATCGATA TCAGCGCTGG CATCGCGATC GAGGATATCG GAAGATGCGA TGTCGGCAGC ATGCATATCA GCGCCGATCT GGCGCTCTAC GAAGCCAAAA GCATGGAAGA CAAGCCCTGG TCGATCTTCA TCGATGCGAT GGACACCAAA TATCGCGGGC GCCAGAAACT CAAAGCCGAT TTGCGGCTTG CCATCGAGCA TGGCGAGATC AAGGTCGTCT ATCAGCCCAT CGTCAGCGCG CAGTCCCTGC GCGTTGTTGC GTGTGAAGCG CTGGCGCGCT GGGAGCATCC GCAGCTTGGC TTTGTGCCGC CTGCGGAATT CATTCCGCTT GCGGAAGAAA TGGGCATCAT CACCGACATT ACCCGCTTCA TGCTGGCGCA GGCCTGTGCC GACTGTCTGT CATGGGGCGA CCGCATCGGT GTTTCGGTCA ATCTTTCGGC CATCGATCTG AAAAGCAATG ACATCGCCCG CGACATCGCC AATGCCTTGC AGAAATCGGG CCTTCCGGCT CACCGCCTTG AGGTGGAAGT GACGGAAAGC GCCATCATCT CGGACCGCAA CAAAACTTCG ATGGTGTTGC AGCGGCTCAA GAACGCCGGG ATCAATATCG CACTGGATGA TTTCGGCACC GGCTATTCCA GTCTCAGCTA TCTCAATACC TTGCAATTGA CCAAGGTGAA GGTCGACCGT TCCTTCGTGC GCGACATTAC CACCGACCGG CGCTCGCTCA TGCTGCTTCG CGGCGTTACA CAGCTTTCGC ACGAGCTTGG GCTGGGCGTG ACAGTCGAAG GTGTCGAAAC AGAGGAACAG CTTGCGCTGA TCCGTGTGGC GGCGGGTGCC GATCTCGTAC AGGGCTATCT TCTCGGTATG CCTGTGCCTG TGGAAGCGAT CAGCGCTATG ACCACGAAAG CCGCAGCGCG CCGCGACGGC GGGCGAACCG TCGCCTGA
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Protein sequence | MWQSRKPEIP ADVRLSFLRA LYGNRTTLWF GLLAHVVACV VIYVKTDDWR YLVFGGVFAI IAVGRIFDMH KFDQAKQQSL SHADLDRWET RYLIGASAVC LTLGMLCFFS SYVLRDSFAE LASLTVLLAS VVSIVGRNYA SAKAVVLMSA CTLIPVLAGL ILAGTPFHVI IGLLLIPYFL SNIQMANGLR EFLFAAVMGK RRLSIVAGRF DAALNNMPQG LLMFDSQQRI AVINNKAKAM LQIAEHTKLH GRKLDVLLRY CAKKGLFPQN DLKSVHVRMQ DLLLGKRTRD IFQLSNQRYI ECIGNQTLNE GAVLMFEDVT QRVEAEARIQ HMARYDGLTG LPNRNYFETL VRSMRSHQQA GTQAALIVID INHFKHVNDT LGHHTGDVLL RLFAERLNSL DPQRFVASRF GGDEFVVFVF NLRSEADVAG VMDHIMTVVT GVYDLDGDQV HIDISAGIAI EDIGRCDVGS MHISADLALY EAKSMEDKPW SIFIDAMDTK YRGRQKLKAD LRLAIEHGEI KVVYQPIVSA QSLRVVACEA LARWEHPQLG FVPPAEFIPL AEEMGIITDI TRFMLAQACA DCLSWGDRIG VSVNLSAIDL KSNDIARDIA NALQKSGLPA HRLEVEVTES AIISDRNKTS MVLQRLKNAG INIALDDFGT GYSSLSYLNT LQLTKVKVDR SFVRDITTDR RSLMLLRGVT QLSHELGLGV TVEGVETEEQ LALIRVAAGA DLVQGYLLGM PVPVEAISAM TTKAAARRDG GRTVA
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