Gene Oant_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1380 
Symbol 
ID5379320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp1456308 
End bp1458605 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content57% 
IMG OID640834039 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001369926 
Protein GI153008711 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAAA GCCGTAAACC TGAGATACCT GCAGATGTGC GGCTATCTTT TCTCAGAGCG 
CTGTATGGTA ATCGTACCAC GCTCTGGTTT GGCTTGCTCG CGCACGTTGT AGCCTGTGTC
GTCATCTATG TGAAAACCGA TGACTGGCGC TATCTGGTTT TTGGCGGTGT ATTTGCCATC
ATTGCTGTTG GTCGCATCTT CGATATGCAC AAGTTCGACC AGGCAAAACA GCAGTCGCTG
TCCCATGCCG ATCTCGACCG CTGGGAAACA CGCTATCTGA TCGGTGCGTC CGCCGTCTGC
CTGACGCTCG GCATGTTGTG TTTCTTCTCA AGCTATGTGC TCAGGGATTC CTTTGCCGAA
CTTGCCAGCC TGACCGTGCT GCTTGCTTCG GTCGTTTCCA TTGTGGGCCG CAATTATGCA
TCGGCGAAAG CCGTTGTTCT GATGTCGGCC TGCACGCTGA TCCCGGTTCT GGCCGGGCTT
ATTCTGGCGG GAACGCCGTT TCACGTCATC ATTGGCCTGC TGCTGATCCC GTATTTCCTG
TCCAACATCC AGATGGCAAA CGGTCTGCGC GAGTTTCTCT TCGCTGCAGT CATGGGCAAG
CGACGCCTGT CCATTGTGGC CGGGCGTTTC GATGCTGCCC TCAACAACAT GCCGCAGGGC
TTGCTGATGT TCGACAGCCA GCAGCGCATT GCGGTCATCA ACAATAAGGC CAAGGCGATG
TTGCAGATCG CTGAACACAC CAAGCTGCAT GGCCGCAAGC TCGATGTTCT GCTGCGCTAT
TGCGCGAAGA AGGGACTGTT TCCGCAAAAC GACCTGAAAA GTGTGCATGT GCGCATGCAG
GATCTTCTGC TGGGCAAGCG CACGCGCGAT ATTTTCCAGC TTTCGAACCA GCGTTATATC
GAATGTATCG GCAATCAGAC CCTCAATGAG GGGGCCGTCC TGATGTTCGA GGATGTGACG
CAGCGCGTGG AAGCGGAAGC GCGCATTCAG CATATGGCGC GTTATGACGG CCTGACAGGC
CTGCCGAACC GCAATTATTT CGAAACCCTG GTGCGATCCA TGCGTTCCCA CCAGCAAGCG
GGCACGCAGG CTGCGCTCAT CGTCATCGAC ATCAATCATT TCAAGCATGT CAACGATACG
TTGGGGCATC ATACCGGTGA CGTATTGCTG CGCCTGTTTG CAGAGCGGCT GAACTCGCTC
GATCCGCAGC GTTTCGTCGC GTCACGCTTC GGCGGCGACG AATTCGTGGT GTTCGTCTTC
AATCTGCGCA GCGAGGCCGA CGTTGCAGGC GTGATGGATC ATATCATGAC CGTCGTGACC
GGCGTCTACG ATCTCGACGG CGATCAGGTG CATATCGATA TCAGCGCTGG CATCGCGATC
GAGGATATCG GAAGATGCGA TGTCGGCAGC ATGCATATCA GCGCCGATCT GGCGCTCTAC
GAAGCCAAAA GCATGGAAGA CAAGCCCTGG TCGATCTTCA TCGATGCGAT GGACACCAAA
TATCGCGGGC GCCAGAAACT CAAAGCCGAT TTGCGGCTTG CCATCGAGCA TGGCGAGATC
AAGGTCGTCT ATCAGCCCAT CGTCAGCGCG CAGTCCCTGC GCGTTGTTGC GTGTGAAGCG
CTGGCGCGCT GGGAGCATCC GCAGCTTGGC TTTGTGCCGC CTGCGGAATT CATTCCGCTT
GCGGAAGAAA TGGGCATCAT CACCGACATT ACCCGCTTCA TGCTGGCGCA GGCCTGTGCC
GACTGTCTGT CATGGGGCGA CCGCATCGGT GTTTCGGTCA ATCTTTCGGC CATCGATCTG
AAAAGCAATG ACATCGCCCG CGACATCGCC AATGCCTTGC AGAAATCGGG CCTTCCGGCT
CACCGCCTTG AGGTGGAAGT GACGGAAAGC GCCATCATCT CGGACCGCAA CAAAACTTCG
ATGGTGTTGC AGCGGCTCAA GAACGCCGGG ATCAATATCG CACTGGATGA TTTCGGCACC
GGCTATTCCA GTCTCAGCTA TCTCAATACC TTGCAATTGA CCAAGGTGAA GGTCGACCGT
TCCTTCGTGC GCGACATTAC CACCGACCGG CGCTCGCTCA TGCTGCTTCG CGGCGTTACA
CAGCTTTCGC ACGAGCTTGG GCTGGGCGTG ACAGTCGAAG GTGTCGAAAC AGAGGAACAG
CTTGCGCTGA TCCGTGTGGC GGCGGGTGCC GATCTCGTAC AGGGCTATCT TCTCGGTATG
CCTGTGCCTG TGGAAGCGAT CAGCGCTATG ACCACGAAAG CCGCAGCGCG CCGCGACGGC
GGGCGAACCG TCGCCTGA
 
Protein sequence
MWQSRKPEIP ADVRLSFLRA LYGNRTTLWF GLLAHVVACV VIYVKTDDWR YLVFGGVFAI 
IAVGRIFDMH KFDQAKQQSL SHADLDRWET RYLIGASAVC LTLGMLCFFS SYVLRDSFAE
LASLTVLLAS VVSIVGRNYA SAKAVVLMSA CTLIPVLAGL ILAGTPFHVI IGLLLIPYFL
SNIQMANGLR EFLFAAVMGK RRLSIVAGRF DAALNNMPQG LLMFDSQQRI AVINNKAKAM
LQIAEHTKLH GRKLDVLLRY CAKKGLFPQN DLKSVHVRMQ DLLLGKRTRD IFQLSNQRYI
ECIGNQTLNE GAVLMFEDVT QRVEAEARIQ HMARYDGLTG LPNRNYFETL VRSMRSHQQA
GTQAALIVID INHFKHVNDT LGHHTGDVLL RLFAERLNSL DPQRFVASRF GGDEFVVFVF
NLRSEADVAG VMDHIMTVVT GVYDLDGDQV HIDISAGIAI EDIGRCDVGS MHISADLALY
EAKSMEDKPW SIFIDAMDTK YRGRQKLKAD LRLAIEHGEI KVVYQPIVSA QSLRVVACEA
LARWEHPQLG FVPPAEFIPL AEEMGIITDI TRFMLAQACA DCLSWGDRIG VSVNLSAIDL
KSNDIARDIA NALQKSGLPA HRLEVEVTES AIISDRNKTS MVLQRLKNAG INIALDDFGT
GYSSLSYLNT LQLTKVKVDR SFVRDITTDR RSLMLLRGVT QLSHELGLGV TVEGVETEEQ
LALIRVAAGA DLVQGYLLGM PVPVEAISAM TTKAAARRDG GRTVA