| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1289 |
|---|
| Symbol | |
|---|
| ID | 5381112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1365508 |
|---|
| End bp | 1366515 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640833946 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001369835 |
|---|
| Protein GI | 153008620 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.205321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGAG TTGGAATGTG GAAAGCGGAT ATCCGTCTTT TCAAGGAGGT CGCTTTGCTG
GCTTACATAT CCGGGCGATT GGTTTCGCTC CTGCTTACGA CGCTTGCGGC TTCCGTCATC
GTCTTTCTGC TGATGCAGGT GCTACCGGGG GATCCGGCGG CGGTGATCCT CGGTATCAAT
GCGCAACCTG AAACGCTGGC AGCACTTCAC AAGCAGCTCG GCCTCGATCA GCCACTCTGG
TGGCGTTATC TCGAATGGAT TGGCGGTTTT CTGAAAGGTG ATTTCGGAAC GAGCTATACT
TATTCCGTGC CGATCAGCGA ACTGCTCGGA CCACGCATTA TGGTCACGCT GCCGCTGGCG
CTTTTGTCCA TGGTGCTGTC CGTTGCTGTT GCCATTCCTG TTGGCGTCTA TGCGGCGTCC
AAGCGTGGCA AGACCGGTGA TGTGCTTTCC ATGGGCGTGG CACAGGTCGG TGTTGCAATT
CCGAATTTCT GGCTCGGTCT TCTTTTGATC CTGTTCTTCG CCTTGCAGCT CGGCTGGTTT
CCGGCTTCGG GTTTCGCCGG ATGGGAGAAT GGTTTCTGGA TAGGGATACG CTCACTTTTT
CTGCCTGCGC TGGCCCTTGC CTTGCCGCTT GCTGCAATTC TGGCCCGCGT AACCCGATCT
GCCGTCATTG AAACGCTGGG TGAGGATTTC GTGCGGACTG CGCGCGCCAA GGGGCTCACA
CGTAACGCAG CACTCTGGCG TCACGCAGTG CCCAATGCAC TGATCCCGGT TGTCACCATC
ATCGGCCTGC AATTCTCCTT TCTGCTGGCA GGAACCATCA TCATCGAAAA TGTCTTCAAT
CTGCCCGGCC TTGGAAGGCT GGTGTTTCAG GCCATCGCGC AGCGCGATCT CGTCACCGTG
CAGTCACTGG TGACGCTGCT TGCCGCTTCG GTGATCGCGG TCAATTTCAT TGTCGATCTT
GTCTATGGCT TCATCGATCC GCGCCTTTCG ACGGGAGGCA GCCGATGA
|
|---|
| Protein sequence | MRRVGMWKAD IRLFKEVALL AYISGRLVSL LLTTLAASVI VFLLMQVLPG DPAAVILGIN
AQPETLAALH KQLGLDQPLW WRYLEWIGGF LKGDFGTSYT YSVPISELLG PRIMVTLPLA
LLSMVLSVAV AIPVGVYAAS KRGKTGDVLS MGVAQVGVAI PNFWLGLLLI LFFALQLGWF
PASGFAGWEN GFWIGIRSLF LPALALALPL AAILARVTRS AVIETLGEDF VRTARAKGLT
RNAALWRHAV PNALIPVVTI IGLQFSFLLA GTIIIENVFN LPGLGRLVFQ AIAQRDLVTV
QSLVTLLAAS VIAVNFIVDL VYGFIDPRLS TGGSR
|
|---|
| |