| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1221 |
|---|
| Symbol | |
|---|
| ID | 5380261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1289695 |
|---|
| End bp | 1291212 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640833870 |
|---|
| Product | Tol-Pal system YbgF |
|---|
| Protein accession | YP_001369767 |
|---|
| Protein GI | 153008552 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAC CAATGAGGAA AGTGACGCTG GCAATTGCCA TGCTGCCGCT TTTGGTGAGT
GCTCCGGTTC TGGCGGCATC TGTTTCTTCG CAAGGGGGGA TTCAGCTCGC GCAGGCAGGT
GCTCCCGGCG GCGATCAGTT TTCGCAGCAG GTCTGCAATC TGGCACATCA AAACGCCCAG
TCCTATGCGC GCATCTTGCA GCTTCGCGAC AAGATGCTGA AAATCCAGCG CGACAACGAA
GCGCGTTTTC AGGCCTTGGA GAAGGGCCGT GGCGGCGCCC AGAATCATGT CAGCATCGGT
TCGACAGCAA TTCTCGATGA CGCCATGCGT GATAATGGCA GCGGCGGCGG TCAGGGCGGC
GGCTATCAAA GTCCCGGCCT GCAGCAGGAA CTGGTGCGCA ACCTGACCGG AAAGGTCGAG
GACGTGGACG CCCAGATTTC TTTCACCGAC AATCAGCTGC AAAAGACGCA GGAAGACAAT
GAATTCCGGT TTGAAGAACT GGAAAAGAAG AACGGCGTAA CCCCGCCTGC TTCCAGTGGT
GCAGCTCAAG CGGCTCCCGC GGCAGCATCG CCGGGCGCCG ATCTCTGCGC GCAGGGCATG
GGCAACCCCG CTGCGATAGC AGATGCGCTG GGTGCGCGTG CGGAAGCCAT GAACTTCCAG
ATCCTCGAAA TGCAGGATCA GATGCAGAAG ATGCAGGAAG CAAACGAAGG CCGTTTCCAG
TTTCTGGAAA CCGGCAAACG CGCCGATGCG GAAGTGCAGC AGGCTGGCGG CGACACGTCG
CTCGCCGATG CTGGTTCCAG CCAAGGGACC AGTCAGGGCA ATAACGGAAA CCTCGTTGGC
GGGGTTTCCG GAAGCGCCCC GCAGAACGGT GGATACAACG CTTCTTCGCA GACTGCGGCC
AACCAGTCTT CTGGCGCCGA TTCCATGGCT ATTGGTTCGA ACGCACCCGC ACAGGGTGGA
CCGGAACGTG GCGAGCCGCC GCAGTCGCTG GGTTCCATCC GGTTCGACGC CAATGGCAAT
GTAATCGGCG AAACGCTTGA TGCCACACCG CGCACGGCAC AGCCGGGTGC GGCACCCGGC
GCCACCTCGG GAGGAAATGC TGCAGGCGAT ACGGTTGCAT CCCTTCCGAC GGACGATAAT
CCCAGTTCGC TCTATCAGGC TTCCTATCAG TATCTGATGT CGGGCGATTA CAAGGCAGCC
GAAACCGGCT TCCGCGAGCA TGTGAAGCGT TATCCGGCTG ATCCCAATAC GGCGGAAGCA
CGCTTCTGGC TCGGAGAATC GCTTTACGGT CAGGGCCGTT ATCCGGAAGC GGCGACGGTA
TTCATTGATA CGCAGCGCGA TTATCCCGAT TCGAAACGCG CGCCGGAAAA CATGTTCAAG
CTCGGCATGA CGCTTGAAAA GATGGACAAT CGCGATGTCG CCTGCGCGAC CTTCGCGCAG
ATTCCAGAAC GTTACCCCAA GGCAGCGCCC GCGATATTGA AGCGCGTTGC CGATGAGCGC
AGCCGCGCAA AGTGCTGA
|
|---|
| Protein sequence | MRKPMRKVTL AIAMLPLLVS APVLAASVSS QGGIQLAQAG APGGDQFSQQ VCNLAHQNAQ
SYARILQLRD KMLKIQRDNE ARFQALEKGR GGAQNHVSIG STAILDDAMR DNGSGGGQGG
GYQSPGLQQE LVRNLTGKVE DVDAQISFTD NQLQKTQEDN EFRFEELEKK NGVTPPASSG
AAQAAPAAAS PGADLCAQGM GNPAAIADAL GARAEAMNFQ ILEMQDQMQK MQEANEGRFQ
FLETGKRADA EVQQAGGDTS LADAGSSQGT SQGNNGNLVG GVSGSAPQNG GYNASSQTAA
NQSSGADSMA IGSNAPAQGG PERGEPPQSL GSIRFDANGN VIGETLDATP RTAQPGAAPG
ATSGGNAAGD TVASLPTDDN PSSLYQASYQ YLMSGDYKAA ETGFREHVKR YPADPNTAEA
RFWLGESLYG QGRYPEAATV FIDTQRDYPD SKRAPENMFK LGMTLEKMDN RDVACATFAQ
IPERYPKAAP AILKRVADER SRAKC
|
|---|
| |