Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1190 |
Symbol | |
ID | 5378781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 1260849 |
End bp | 1262840 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640833839 |
Product | transketolase |
Protein accession | YP_001369736 |
Protein GI | 153008521 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAATT CCGACAAACA AAACCAGATG GCCAACGCGA TCCGCTTCCT CTCTATGGAC GCGGTAGAGA AAGCCAATTC GGGCCATCCC GGCCTGCCGA TGGGTGCAGC CGATATAGCG ACGACGCTTT ATACCCGTTT TCTCTCGCAC GACCCGCAGA ACCCGCACTG GCCGGATCGC GACCGTTTCG TGCTCTCCGC AGGCCACGGC TCGATGCTGC TCTATTCGCT GCTCTATCTT TCGGGCTACG AAGACATCAC CATCGACGAG ATCAAGAATT TCCGTCAGCT CGGTTCGCGC ACAGCAGGCC ATCCGGAATA TGGTCACGCC GCCGGTATCG AGACGACGAC CGGCCCGCTC GGACAGGGTA TCGCCAATGC CGTCGGCATG GCACTTTCCG AACGTATCCT CAATGCACAG TTCGGCGACA GCCTCGTCAA CCATTACACC TATGTGATTG CCGGTGACGG CTGCCTCATG GAAGGCATCA GTCAGGAAGC CATCGCGCTT GCCGGTCATC TGAAGCTGAA CAAGCTGATC GTGTTCTGGG ATGACAACAA CATCTCGATC GACGGCCCGG TCACGCTTTC CGACAATACC AATCAGCCAG CCCGTTTCGC CGCTTCCGGC TGGAACACCA TGGCTGTTGA TGGTCACGAT CAGGATGCGA TTGCCAAGGC AATCGAACTG GCCAAGGTTT CCGACAAGCC GACGCTCATC GCCTGCAAGA CGACCATCGG CTTCGGCGCA CCAAACAAGG CTGGCACCAA CAAGGTGCAT GGCTCGCCGC TCGGTGCTGA AGAAATCGCT GCAACCCGCA AGGCGCTCGG CTGGAATGCT GAACCCTTCG TCGTTCCGGC AGAAGTGCTG GACGGCTGGC GCGTTGCCGG TCTGAATGCC GCCAGGAAGC GTCAGGAATG GGAAAAGCGC TTTGCTGCCG TCGAAGCGGA CACCCGCGCT GAATTCGAGC GCCGGATGCG TGGCGACCTG CCTTCCAACT TCGATGCAAC CATCATCGAA TACAAGAAGA AGCTGTCCGC GGACAAGCCG AAGGTCGCAA CCCGCAAGTC TTCGGAAATG GCACTGGAAG TCATCAATGG TGTCGTGCCG GAAACCATCG GCGGCTCCGC CGATCTCACC GGTTCGAACA ACACCAAGAC GAGCCAGACC AAGGCCATAA CGCCGGAAGA CTACGGCCAG CGTTACGTCC ATTACGGTAT CCGTGAGCAC GGCATGGCAG CAGCCATGAA CGGCATGACG CTGCATGGCG GGCTGATCCC TTACGGCGGC ACCTTCCTGA CCTTCTCGGA TTATTGCCGT CCGGCTATGC GCCTTTCCTC GCTGATGGGC ATCCGCGTCG TTTACGTGAT GACGCATGAC TCCATCGGTC TTGGTGAAGA CGGCCCGACC CACCAGCCGG TAGAACAGCT TGCCGCCTTG CGCGCCATTC CGAACCACAA TGTGTTCCGC CCTGCCGACG CTGTCGAAGC GGCTGAATGC TGGCAGATTG CCCTGCAATC GAAGAAGACG CCATCGACGA TGGCTCTGAC TCGCCAGAAC CTGCCAACGG TCCGTACCGA GCATCGCGAC GAAAACCTTT CGGCTTTCGG CGCCTATGAA CTTGCTGCGG CAAGCAAGGA TGCCAAGGTG ACGATCTTCG CGACCGGTTC GGAAGTGGAA ATCGCACTCA AGGCCCGCGA CCTGCTGGAA GGCAAAGGCA TTGCCACCCG TGTCGTTTCG GTTCCTTGCT TCGAGCTTTT CGAACAGCAG AGCGATGCCT ACAAGACCGC GACCATCGGC AATGCGCCGG TCAAGGTGGC GATCGAAGCG GCAATCTCAC TCGGCTGGGA ACGCTTCATC GGCGAGAACG GCATATTCAT CGGCATGAAG GGCTTCGGCG CTTCGGGCGA GATCAACGAT CTCTACAAGC ATTTCGGCAT CACGGCAGAA CATGCCGCTG AAGCTGCGGA GAAGAAGCTC AACGCCGCAT GA
|
Protein sequence | MTNSDKQNQM ANAIRFLSMD AVEKANSGHP GLPMGAADIA TTLYTRFLSH DPQNPHWPDR DRFVLSAGHG SMLLYSLLYL SGYEDITIDE IKNFRQLGSR TAGHPEYGHA AGIETTTGPL GQGIANAVGM ALSERILNAQ FGDSLVNHYT YVIAGDGCLM EGISQEAIAL AGHLKLNKLI VFWDDNNISI DGPVTLSDNT NQPARFAASG WNTMAVDGHD QDAIAKAIEL AKVSDKPTLI ACKTTIGFGA PNKAGTNKVH GSPLGAEEIA ATRKALGWNA EPFVVPAEVL DGWRVAGLNA ARKRQEWEKR FAAVEADTRA EFERRMRGDL PSNFDATIIE YKKKLSADKP KVATRKSSEM ALEVINGVVP ETIGGSADLT GSNNTKTSQT KAITPEDYGQ RYVHYGIREH GMAAAMNGMT LHGGLIPYGG TFLTFSDYCR PAMRLSSLMG IRVVYVMTHD SIGLGEDGPT HQPVEQLAAL RAIPNHNVFR PADAVEAAEC WQIALQSKKT PSTMALTRQN LPTVRTEHRD ENLSAFGAYE LAAASKDAKV TIFATGSEVE IALKARDLLE GKGIATRVVS VPCFELFEQQ SDAYKTATIG NAPVKVAIEA AISLGWERFI GENGIFIGMK GFGASGEIND LYKHFGITAE HAAEAAEKKL NAA
|
| |