Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1180 |
Symbol | |
ID | 5380086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 1251100 |
End bp | 1251801 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640833829 |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_001369726 |
Protein GI | 153008511 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGTG CAGACCGCCT TTTCCAGATT GTTCAGCACC TGCGCGGTGG CAGGCTCGTC ACCGCGCGCC AGCTGGCCGA GCGGCTGGAA GTCTCCGAAC GCACCATCTA TCGCGATATT TCCGATCTGC AGTCGACTGG CGTCCCCATC GATGGCGAAG CCGGTGTCGG CTATATTCTG CGGCAAGGCT TCGAACTCCC GCCGCTTATG TTCACGCGCG ATGAAATCGT CGCTCTGGTT GCCGGGGCGC GCCTCATCCG CGCCTGGGGC GGCGTTTCCA TGGCGCGTGG TGCAGAAGAG GCTCTGGTCA AGATCGAAGC CGTTCTGCCC AAGGAAGAAC GCGCTCGTAT CACAAGTACT CAGATACATG CGCCCACGGC CCGCATCAGC ATGGACGAAC GCCGTATCAT CGACGCGGTG GAACGCGCCG TCGATCAGGG CAATGTACTC AATATCCGCT ATCGAGATCT GGAATCGCGC GAAAGCGAGC GTGATATTCG CCCGCTTGGT CTGTGGTTCT GGGGCAAGGT CTGGACGGTT ATCGGCTGGT GCGAATTGCG CAATGCTTTC CGCACATTCC GGACCGACCG TATCGTTGAG GCCAGCGACG CAGGCCGCCT CTTCCGGGCC GAACGCGGCA AGACGCTGGG CGATTTCTAC CGCCTCATGG AACTGAGCGA ATATAACGCT TTTAAAGACT GA
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Protein sequence | MRRADRLFQI VQHLRGGRLV TARQLAERLE VSERTIYRDI SDLQSTGVPI DGEAGVGYIL RQGFELPPLM FTRDEIVALV AGARLIRAWG GVSMARGAEE ALVKIEAVLP KEERARITST QIHAPTARIS MDERRIIDAV ERAVDQGNVL NIRYRDLESR ESERDIRPLG LWFWGKVWTV IGWCELRNAF RTFRTDRIVE ASDAGRLFRA ERGKTLGDFY RLMELSEYNA FKD
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