Gene Oant_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1142 
SymboltbpA 
ID5378622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand- 
Start bp1202605 
End bp1203609 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID640833794 
Productthiamine transporter substrate binding subunit 
Protein accessionYP_001369691 
Protein GI153008476 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.493947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTTT TATCTTTGCT GGCCTTTTCA TTCTCCACAG CCCTCGCTTT CACGCCTTCT 
GCGCAGGCGA AGGACAAGCT CACTGTTTAT ACCTATGACA GTTTCGTTTC CGAATGGGGT 
CCGGGCCCGA AGATCAAGGA AAACTTCGAG AAGGAATGCG ATTGCGAAGT GGACTGGATC 
GCTTCGGCCG ACGGTGTCGC GCTGCTCAAC CGCCTGAAGC TTGAAGGTGG CAATACCAAA 
GCCGATATCG TCCTCGGTCT CGATACCAAT CTGACGACCG AAGCACGCGC CACCGGCTTT 
TTTGCTCCAA GCGGCATCGA CCAAAGCAAT GTGAGCATTC CGGGCGGGTT CAAGGACAAT 
ATCTTCGTTC CCTATGATTA TGGCTACTTC GCCGTGGTTT ACGATTCGGA AAAATTGCCC 
AATCCGCCCA AGAGCCTGAA AGAACTGGTG GAAGGCGATG CTTCCCAGAA GATCGTGCTG 
CAAGACCCGC GCACGTCGAC GCCAGGGCTG GGCATGTTGC TCTGGATGAA ATCGGTTTAT 
GGCGACGAAG CGGAAGCGGC CTGGCAGAAA CTGCAGAAGC GTGTTCTCAC CGTCACACCC 
GGCTGGTCGG AAGCCTATGG TCTTTTCACC AAGGGTGAAG CGCCGATGGT GCTGTCCTAT 
ACAACGTCTC CCGCCTATCA CATGATTGCG GAAAAGACGG AGCGCTATAA GGCTCTGGCC 
TATCCGGAAG GTAATTATCT CCAGATCGAG CTGGCCGCCC AGACCACCAC TGGTGCGAAA 
AATCCACTGG CACAAAAGTT CCTGGCTTTC ATGACCAGCC CCGGCTTTCA GGATGTTATT 
CCTGAAACCA ACTGGATGTA TCCAGCGAGC AAGACATCCA CCCCGCTTCC AGCCGCTTTC 
GACGCGATGC CGAAGCCGGA AAAGACTCTT CTCCTGCCTT CCGACGAAGT AGCCAAGAAC 
CGGAAGTCAT GGGTCGATGA ATGGCTGGCG GCGACCAGTA AATGA
 
Protein sequence
MRLLSLLAFS FSTALAFTPS AQAKDKLTVY TYDSFVSEWG PGPKIKENFE KECDCEVDWI 
ASADGVALLN RLKLEGGNTK ADIVLGLDTN LTTEARATGF FAPSGIDQSN VSIPGGFKDN 
IFVPYDYGYF AVVYDSEKLP NPPKSLKELV EGDASQKIVL QDPRTSTPGL GMLLWMKSVY 
GDEAEAAWQK LQKRVLTVTP GWSEAYGLFT KGEAPMVLSY TTSPAYHMIA EKTERYKALA 
YPEGNYLQIE LAAQTTTGAK NPLAQKFLAF MTSPGFQDVI PETNWMYPAS KTSTPLPAAF 
DAMPKPEKTL LLPSDEVAKN RKSWVDEWLA ATSK