| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1117 |
|---|
| Symbol | |
|---|
| ID | 5379304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1171312 |
|---|
| End bp | 1172427 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640833769 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001369666 |
|---|
| Protein GI | 153008451 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000089327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT CACTTTTCTC AGGCGTTGCT CTTGCAGCAG TTATGGCTTT CGGGGGCTCG
GCTTGGGCTG ATGTTCTTGT CGGTATTGGT GCGCCACTGA CGGGCCCAAA TGCCGTTTAC
GGTGCGCAGA TCCAGAAGGG CGCGGAAGCG GCCATCAAGG AAATCAACGA TGCGGGCGGC
ATCAACGGCG AAAAAATCGC GATCACTCTC GGCGATGACG TATCGGATCC GAAGCAGGGT
ATCTCGGTTG CCAACAAGTT CGCAGCTGAT GGCGTGAAAT ACGTTATCGG TCACTTCAAT
TCGGGCGTTT CGATCCCGGC TTCGGACGTT TATGCCGAAA ACGGCATTCT CGAAATCTCG
CCTGCTGCGA CCAACCCGGT CTATACAGAG CGCCAGCTCT GGAACACGTT CCGTACCTGC
GGTCGCGACG ATCAGCAGGG CATCGTGGCC GGTCAGTATA TTTTCGACAA TTTCAAAGAC
GGGAAAATTG CCGTCATTCA CGACAAGACC CCTTATGGTC AGGGCCTTGC CGATGAAACC
AAGAAGAAGC TCAACGAGCT TGGCGTCAAG GAAGCCGTCT ATGAAGGCGT GAATGTTGGC
GAGAAGGATT TCTCGGCTCT GATCGCCAAA CTGAAACAGC AGGGCGTTAC GGTCCTTTAT
TGGGGTGGTC TGCACGCTGA AGCCGGTCTG ATTATCCGTC AGCTTGCCGA TCAGGGGCTG
AAGGTCCAGT TTATCTCTGG CGACGGTATC GTTTCCAACG AGCTGGCCTC CATCGCAGGC
GATGCGGTTG CCGGTACGCT GAATACGTTT GGCCCAGACC CGCGCAATAA CCCGAACAAT
GCCGATTTGG TGAAGAAGTT CCGCGATGCT GGCTTCGAAC CGGAAGCCTA CACGCTTTAC
TCTTACGCTG CCGTTCAGTC TCTGGCTGGG GCTGCGAAGG CTGCCGGAAG CAACGACCCG
CAGGAAGTTG CCAAGGCGCT TAAGGAAAAG GGTCCGTTCA AGACCGTGCT TGGCGACCTG
TCCTATGACG AAAAGGGCGA TCCGAAGCTT CCAGGCTATG TCATGTACAA GTGGGAAAAG
GGCGCTGACG GGAAATATAC TTACATTCAG CAGTAA
|
|---|
| Protein sequence | MKKSLFSGVA LAAVMAFGGS AWADVLVGIG APLTGPNAVY GAQIQKGAEA AIKEINDAGG
INGEKIAITL GDDVSDPKQG ISVANKFAAD GVKYVIGHFN SGVSIPASDV YAENGILEIS
PAATNPVYTE RQLWNTFRTC GRDDQQGIVA GQYIFDNFKD GKIAVIHDKT PYGQGLADET
KKKLNELGVK EAVYEGVNVG EKDFSALIAK LKQQGVTVLY WGGLHAEAGL IIRQLADQGL
KVQFISGDGI VSNELASIAG DAVAGTLNTF GPDPRNNPNN ADLVKKFRDA GFEPEAYTLY
SYAAVQSLAG AAKAAGSNDP QEVAKALKEK GPFKTVLGDL SYDEKGDPKL PGYVMYKWEK
GADGKYTYIQ Q
|
|---|
| |