| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0953 |
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| Symbol | sdhA |
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| ID | 5379807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 987958 |
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| End bp | 989802 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640833598 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001369503 |
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| Protein GI | 153008288 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.643609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGTG CAGTAAACAA CGCGGCCGAT GCTGCCGTGG CAAGCAAATA TACCTATGTC
GATCACAAGT TCGACGTGGT GGTGGTCGGA GCTGGCGGCG CGGGCCTACG CGCAACGCTC
GGCATGGCCG AGCAAGGCCT GAAGACGGCT TGCATCACCA AGGTTTTCCC GACCCGTTCG
CATACGGTCG CAGCGCAGGG TGGCATCGCC GCTTCGCTCA AGAATATGGG CCCGGACAGC
TGGCAGTGGC ACATGTACGA TACCGTCAAG GGATCGGACT GGCTCGGCGA CACCGATGCG
ATGGAATATC TGGCGCGTGA AGCGCCTGCC GCCGTCTACG AACTGGAACA CTACGGTGTG
CCTTTCTCGC GTACGGAAGA AGGCAAGATT TATCAGCGCC CGTTCGGCGG CCACATGCAG
AATTTTGGCG ACGGTCCTCC GGTCCAGCGC ACCTGTGCTG CTGCCGACCG TACCGGCCAC
GCTATCCTGC ATACGCTCTA TGGCCAGTCG CTCAAGAACA ACGCGCAGTT CTTCATCGAA
TATTTCGCGC TCGATCTCAT CATGACTGAC GGTGTCTGCA CCGGCGTCGT GGCGTGGAAC
CTTGATGACG GCACGATCCA TCGCTTCTCG GCCAAGATGG TGGTTTTGGC GACAGGCGGT
TATGGCCGTG CCTATTTCTC GGCAACCTCT GCCCATACCT GCACCGGCGA TGGTGGCGGC
ATGGTTGCAC GTGCCGGCCT GCCACTGCAG GACATGGAAT TCGTACAGTT CCATCCAACT
GGCATCTATG GCGCAGGCTG CCTCATCACC GAAGGTGCGC GCGGCGAAGG CGGTTATCTG
GTCAATTCCG AAGGCGAGCG CTTCATGGAG CGCTATGCCC CTTCGGCCAA GGACCTTGCC
TCGCGTGACG TTGTCTCGCG CTGCATGACC ATGGAAATCC GTGCTGGCCG TGGCGTCGGC
AAGGCCAAGG ATCACATCTT CCTGCATCTT GACCATCTCG ATCCGGCTGT TCTGCATGAA
CGCCTGCCGG GTATTTCGGA ATCGGCCAAG ATTTTCGCAG GCGTCGATGT GACCAAGGAA
CCGATCCCGG TTCTCCCGAC GGTTCACTAC AATATGGGTG GCATTCCGAC CAATTACTGG
GGCGAAGTGT TGAACCCGAC CGAGGCTGAT CCAGACCGCG TACAGCCGGG CCTGATGGCT
GTCGGCGAAG CGGGCTGCGC TTCGGTGCAC GGCGCAAACC GTCTCGGCTC CAACTCGCTG
ATCGATCTGG TCGTGTTTGG CCGTGCGGCT GCAATCCGCG CCGGGCAGGT CATTGATCGC
AAGTCGAAGA TTCCGGACCT CGACGTTACC GCCTGCGACA AGATCATGGA GCGCTTCGAT
CGTCTGCGTT TTGCCAACGG CTCCCAGCCG ACCGCAGAAC TGCGCGAGAA GATGCAGCGT
ACCATGCAGG AAGATGCCGC CGTATTCCGT ACGTCGGAAT CGCTCAAGCA AGGCGTCGAG
CGCATGGAAA AGCTCTGGCA TGAACTGCCG GACATCAAGG TTACCGACCG TTCGATGATC
TGGAACTCCG ATCTCGTCGA AACGCTTGAG CTGGAAAACC TGATGGCGAA TGCGCTGACG
ACGGTTGTTT CCGCCGAAGC GCGCCAGGAA AGCCGCGGTG CCCATGCGCA TGAGGATTTC
CCGGATCGCA ACGATGCCGT GTGGCGCAAG CACACCCTGT CCTGGCTGTC GCCGGATGGC
AAGGTCAAGC TTGACTACCG TCCTGTCCAC CTCGATCCGT TGACGACGGA AGAGGAAGGC
GGCATCAGCC TCGCCAAGAT TGCGCCGAAG AAGCGCGTTT ACTAA
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| Protein sequence | MASAVNNAAD AAVASKYTYV DHKFDVVVVG AGGAGLRATL GMAEQGLKTA CITKVFPTRS
HTVAAQGGIA ASLKNMGPDS WQWHMYDTVK GSDWLGDTDA MEYLAREAPA AVYELEHYGV
PFSRTEEGKI YQRPFGGHMQ NFGDGPPVQR TCAAADRTGH AILHTLYGQS LKNNAQFFIE
YFALDLIMTD GVCTGVVAWN LDDGTIHRFS AKMVVLATGG YGRAYFSATS AHTCTGDGGG
MVARAGLPLQ DMEFVQFHPT GIYGAGCLIT EGARGEGGYL VNSEGERFME RYAPSAKDLA
SRDVVSRCMT MEIRAGRGVG KAKDHIFLHL DHLDPAVLHE RLPGISESAK IFAGVDVTKE
PIPVLPTVHY NMGGIPTNYW GEVLNPTEAD PDRVQPGLMA VGEAGCASVH GANRLGSNSL
IDLVVFGRAA AIRAGQVIDR KSKIPDLDVT ACDKIMERFD RLRFANGSQP TAELREKMQR
TMQEDAAVFR TSESLKQGVE RMEKLWHELP DIKVTDRSMI WNSDLVETLE LENLMANALT
TVVSAEARQE SRGAHAHEDF PDRNDAVWRK HTLSWLSPDG KVKLDYRPVH LDPLTTEEEG
GISLAKIAPK KRVY
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